Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g1004 ATGGTCTTCACTAGTTTATATTTTTTGTCAGCACACACCTATCCATACATTTATTTTCTCTCTTTGGGAAAGCCGCTTAGGCATCAAATTTCTTTCCTTTCAGTGATGGAGGCCCTTGATTCCATGGATGACCTCTTGAATTTCTCATTAGACATAGCTGAGAATGATGATGATGATGATGACGACGACAAAACTAGGAAAGGCTTTTCTTCTCGTAACCCAAAATGCAATGATCCACCGTCATTTAACCCATTGGACCTGGATGATCCTAGCCGTGCATTTTCCGAGTTTGCGGAAGAAGAGCTTGAATGGCTATCCAACAAAGATGCATTTCCTGCGGTTGAAACATTTGTTGACATACCGACTATTCGACCTGACATATCAAAGAACCAAGGGGCAGCCTCAGTGCTTGAATACAGCACAAGTGATAGCAACAGTAATAACAGCACTAATAGCATTAGCCTCTTAAATGGCTATGATCACCTGAAGATCCCTGTCCGTGCACGGAGCAAGTGCCGCAGTAGGCGCCGCCCAGGCATTGCTGACATGTCTAGTCATCAATCCTGGTGGAGAATACCAACTAACGAAATTTCCAAAGCGGAAGCGATAAAAATCCCAACCATTGGGAGGAAATGTCAGCACTGCGGAGCTGAAAAAACACCTCAGTGGCGGGCAGGTCCACTTGGGCCAAAAACTCTTTGTAATGCATGTGGAGTTAGGTTTAAGTCTGGGCGGCTTGTGCCTGAATACCGTCCTGCAAGTAGCCCAACTTTTCGTAATGAATTGCATTCTAATTCGCATAGGAAGATAATGGAGATGAGGAGGCAGAAGCAAATGGGAATGGCTTGA 849 0.4476 MVFTSLYFLSAHTYPYIYFLSLGKPLRHQISFLSVMEALDSMDDLLNFSLDIAENDDDDDDDDKTRKGFSSRNPKCNDPPSFNPLDLDDPSRAFSEFAEEELEWLSNKDAFPAVETFVDIPTIRPDISKNQGAASVLEYSTSDSNSNNSTNSISLLNGYDHLKIPVRARSKCRSRRRPGIADMSSHQSWWRIPTNEISKAEAIKIPTIGRKCQHCGAEKTPQWRAGPLGPKTLCNACGVRFKSGRLVPEYRPASSPTFRNELHSNSHRKIMEMRRQKQMGMA* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g1004 282 Gene3D - 207 279 IPR013088 GO:0006355|GO:0008270
Dod07g1004 282 PANTHER GATA TRANSCRIPTION FACTOR 41 278 - -
Dod07g1004 282 ProSitePatterns GATA-type zinc finger domain. 212 237 IPR000679 GO:0006355|GO:0043565
Dod07g1004 282 SMART GATA_3 206 256 IPR000679 GO:0006355|GO:0043565
Dod07g1004 282 PANTHER GATA TRANSCRIPTION FACTOR 1 41 278 - -
Dod07g1004 282 CDD ZnF_GATA 211 260 IPR000679 GO:0006355|GO:0043565
Dod07g1004 282 MobiDBLite consensus disorder prediction 53 85 - -
Dod07g1004 282 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 208 269 - -
Dod07g1004 282 Pfam GATA zinc finger 212 245 IPR000679 GO:0006355|GO:0043565
Dod07g1004 282 ProSiteProfiles GATA-type zinc finger domain profile. 206 242 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g1004 Dod-Chr7 17659986 17662603 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g1004 36 280 C2C2-Gata Transcription Factor Family AT3G24050 42.593 7.99e-50 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Dod07g1004 GATA 1e-16 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g1004 - - ahf:112789633 362.073