Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0956 ATGTCCCTGCCGTCTTGCCCGGCGGCGCAACTGGCGCAGTTCATCGGCCCCAACGCCACCAACGCCAGCGGGGCCGCCGACCTCATCTGTCAGCAGTTCTCCGCCGTGAGCAACAAGTTCTCCGACACCACCTTCGCCGTGGACAGCACCTACCTCCTCTTCTCCGCCTACTTGGTCTTCTCCATGCAGCTCGGCTTCGCCATGCTCTGCGCTGGCTCCGTCCGCGCCAAGAACACCATGAACATCATGCTCACCAACGTCCTCGACGCCGCCGCCGGAGGCCTCTTCTACTACCTCTTCGGCTTCGCCTTTGCCTTCGGCGCCCCTTCCAACGGCTTCATCGGCCGCCACTTCTTCGGCCTCAAGGACGTCCCCACGCAAGACTTTGACTACAGCTACTTCCTCTACCAGTGGGCCTTCGCTATCGCCGCTGCTGGAATCACCAGCGGCTCCATCGCCGAGCGAACACAGTTCGTCGCATATCTCATCTACTCCTCCTTCCTCACCGGCTTCGTGTACCCCGTGGTGTCGCACTGGTTCTGGTCCGCCGACGGGTGGGCCAGCGCCACCAACACAGGCAACCTACTCTTCGGATCCGGCGTTATCGATTTCGCCGGATCCGGAGTTGTCCACATGGTCGGTGGGGTCGCCGGCCTATGGGGCGCCCTCATCGAGGGTCCCAGGATAGGCCGCTTCGACCACACCGGCAGAGCAGTATCTCTGCGTGGACACAGCGCTTCATTAGTAGTACTCGGTACTTTCATGCTGTGGTTCGGCTGGTACGGATTCAACCCCGGCTCGTTCACCAAAATCTTAAACGCTTACGAGACCGGTAGTTATTACGGCCAGTGGAGTGCTGTTGGTAGAACCGCAGTGACAACTACCTTAGCAGGGTGCACAGCGGCTCTAACAACCCTCTTCGGGAAGAGAATCCTTTCAGGTCATTGGAATGTGACCGATGTTTGTAACGGTTTGCTGGGCGGCTTTGCGGCGATCACGGCAGGGTGTTCCGTTGTGGAGCCATGGGCCGCTATCGTGTGCGGATTCAGTCGCGGCGGTGGTTTTGATTGGGTGCAATAA 1080 0.5981 MSLPSCPAAQLAQFIGPNATNASGAADLICQQFSAVSNKFSDTTFAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGAPSNGFIGRHFFGLKDVPTQDFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSADGWASATNTGNLLFGSGVIDFAGSGVVHMVGGVAGLWGALIEGPRIGRFDHTGRAVSLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILNAYETGSYYGQWSAVGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFSRGGGFDWVQ* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0956 359 TIGRFAM amt: ammonium transporter 48 352 IPR001905 GO:0008519|GO:0016020|GO:0072488
Dod07g0956 359 Pfam Ammonium Transporter Family 51 350 IPR024041 GO:0008519|GO:0016020|GO:0072488
Dod07g0956 359 Gene3D Ammonium transporter AmtB like domains 27 357 IPR029020 -
Dod07g0956 359 ProSitePatterns Ammonium transporters signature. 203 228 IPR018047 GO:0008519|GO:0016020|GO:0072488
Dod07g0956 359 PANTHER AMMONIUM TRANSPORTER 1 MEMBER 1 5 349 - -
Dod07g0956 359 PANTHER AMMONIUM TRANSPORTER 5 349 - -
Dod07g0956 359 SUPERFAMILY Ammonium transporter 47 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0956 Dod-Chr7 15085609 15086688 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0956 5 349 Inorganic Solute Cotransporters AT4G13510 84.393 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0956 K03320 - egt:105950262 606.29