Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0948 ATGGAGAAACTTATCCATCCTTTGGCAAAAATTGCTCCTCTACATGAGTGCTGGAGAGTCAAAGTTCGAGTTATATGGCTATGGACTCTCCCAAGCTTTAGCGACCCATTAACCATTAACTCAATCGAAATGGTTTTTGTGGATGAGTTTGGATCTACTATCCATGCTTCTGTCCGGAGGAATTTGGTGAATATGTTTAAATCTCAACTGAAAAAAGGACATGTTTACATTTTTGCAAATTTTGGGGTTGGTGAAAATACTGAAAATTTTCGCACTACCCATCATGAGTTTCGTTTGAACTTCCAGTCGAGAAGTACTGTTATCGAGTCTAATAGTGATACCATTCCTAGGTATGATACTATGGGAATGCTAACTGCTGTGGGCAATGAGAGGGGGTTAGATAAAGGTGGAAAGAAAACAAGAATGATTGTAATCCAGTTGGAAGCTGAAGGTGTGGTTGCTGCATCATCTGAGTCTCGGTCTGTTTCTCTATTGTGTGGTGCTCAATCTTATTCGTTTGAAAATTATTTCCTCAATTCAACACCTTCGAAGATGATTGGAGAACTAAAAGACTGTAAAGAGGATAGTTTCTACATAGTATATGCTACTATTGTTGCTGTCACCAATGATGAGGATTGGTGGTATATAGCATGCAAATGCAATAAGGCTGTAAACCCTCACTCTGGGATGTATTACTGTAAAAGTTGCTCCTGTCATGTTATGAATGTCACTTCTAGGTACCAAATTAAACTGTCTGTCATGGATGACTCAAGTTCCTCTATCTTTGTGTTATTTGATCGTAAGGCATTTTCTATTCTAAAGATGCCATGTTCATTCTTGCTGGAAAAAACTGAAACAGACCAGGGAGAAACTATTGAGCATCCAAAAGAGTTTCAAGAGTATCTGACTCAGAAGAAATTCCTGTTCAAAGTTGAGGTTAAGACAGGGTTCAGAAGCCATCTTGAACCTTAA 972 0.3858 MEKLIHPLAKIAPLHECWRVKVRVIWLWTLPSFSDPLTINSIEMVFVDEFGSTIHASVRRNLVNMFKSQLKKGHVYIFANFGVGENTENFRTTHHEFRLNFQSRSTVIESNSDTIPRYDTMGMLTAVGNERGLDKGGKKTRMIVIQLEAEGVVAASSESRSVSLLCGAQSYSFENYFLNSTPSKMIGELKDCKEDSFYIVYATIVAVTNDEDWWYIACKCNKAVNPHSGMYYCKSCSCHVMNVTSRYQIKLSVMDDSSSSIFVLFDRKAFSILKMPCSFLLEKTETDQGETIEHPKEFQEYLTQKKFLFKVEVKTGFRSHLEP* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0948 323 Pfam Domain of unknown function DUF223 43 111 IPR003871 -
Dod07g0948 323 Gene3D - 3 109 IPR012340 -
Dod07g0948 323 CDD RPA1_DBD_C 197 314 IPR013955 -
Dod07g0948 323 PANTHER REPLICATION FACTOR A 1, RFA1 22 277 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Dod07g0948 323 CDD RPA1_DBD_A_like 19 107 - -
Dod07g0948 323 Gene3D - 174 319 IPR012340 -
Dod07g0948 323 Pfam Replication factor-A C terminal domain 197 315 IPR013955 -
Dod07g0948 323 SUPERFAMILY Nucleic acid-binding proteins 184 315 IPR012340 -
Dod07g0948 323 SUPERFAMILY Nucleic acid-binding proteins 5 112 IPR012340 -
Dod07g0948 323 PANTHER ANIMAL RPA1 DOMAIN PROTEIN 22 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0948 Dod-Chr7 14741148 14743437 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0948 5 118 Core DNA Replication Machinery Family AT5G45400 26.724 2.54e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0948 - - vun:114169438 214.542