Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0935 ATGGGATTCAGTGGTCATAGAAATTCGTTATATTTTTCAATCATATTTTGTTGCCTGCATTTGGATTCTGGTACTGCCACAGACACCATCACTTCATCTCAACTCATCAAGGACCCTGAAACCATAGCCTCCAAAAGTGGTATGTTCACTTTAGGATTCTTTAGCCCTGAAAATTCCACAAACCGTTATGTGGGAATTTGGTACAAGACCAGATCCCTAGTTGTATGGGTAGCTAACAGAAACCAACCACTCAAAGATTCTTCTGGGAGTCTTACAATATCCAAGGATGGCAATCTTGTGGTATTGAATGGGCAAAAGCAGGCCGTTTGGTCATCAAATTTGTCCAATAATGTTTCATCCAACACTACTGCCCAACTTCTAGATTCTGGAAACCTTGTCCTTCAGGATGCTACAGGAAGACAAGTATGGGAGAGTTTCTTACAACCTACTGACACTTTGCTACCAGATATGGAAATAATCTCAAACAACAAAAGCATTGGTGTGAAACAAGGTATATCTTGGAAAAGCCCTTCTGACCCATCCATTGGAAACTTCGGTCTCAGTCTTGAACGGCCGAATGTTCCAGAACTGTTCATATGGGAGGGAATTAGGCCATACTGGCGCAGTGGTCCCTGGAATGGTCGTACATTCACAGGAATTCCCGATATGCTACCTGTTTATCGCCTTGCGGGATTCAGCATGGTACAAGAAGGTGATAATAGTGTTCTACTTGTCTACACTCCGGAAAGTGACGATAGGTTGGTAGTCTACAAGTTAGACTGGGAAGGTAAAATAAGGGAGCTAATATGGGATGTTAAGAAGAATGAATGGGATGTTTTGTGGACTGAACAACAGTCTGGGTGTGAAGTTTATGGTATGTGTGGAGCATATGGAATCTGCAGCGTACAAAGCACACCAATTTGCAAGTGTTTGAGAGGGTTTCAACCAAGAAATGTTTATGAATGGGACAGACAAAACATGACAAGTGGATGTATTAGGAAGACAGCTCTACAGTGTGGAAAGGCCAAAGGTGAAAACGGCACTGTGGACAACAAAAGGGATGGATTTTTGGAGCTGCAGATGGTTAAAGTTCCAGACTTTGCAGAGTGGTCATCGGTTAGTACAGAAGACGCATGTAGAAGCCAGTGCTTGGAGAATTGCACTTGTGTTGCATATTCATACGAAGCTGGGATTGGCTGTATGTCATGGAGTGGCAATCTAATTGACATACAACAATTTCCAAGAGGAGGCATTAATCTATACGTTCGAGTAGCTAACTCAGAACTTGATAAAGAGAGTGATGACAAAGTCATCATTACTGTTACTGGGACTGTAGGGGTGGTCATAGTTGTCAGCTCTGCATATTTCTTGTGGAAACACTTAGCTAGAAAAAGGAAGAACGGAACAAATGACGGTATATTTGGAGAACTATCACGAGTTAAACTGCATGAAGTATTACTATTTGAAGCTGAAATGCTTGCAAGTGCCACAAACAATTTTAACTCTTTGAATAAACTTGGGGAGGGTGGTTTTGGTCCTGTGTACAAGGGGAAACTAAATGATGGTCAAGAAATAGCTGTCAAAAGACTTTCTAGAGCATCTAGACAAGGACTCGAAGAATTCATGAACGAAGTACTAGTTATTTCAAAGTTACAACATCGCAATTTGGTAAGACTTCTTGGTTGTTGTATAGAAGGAGATGACAGGATGCTAATCTACGAGTACATGCCGAATAAAAGTTTGGACACATTTATCTTCGGTCAGTTTTTAAAATCCCAACTGAAAGATGTGTTTTATTTTCTTTGA 1806 0.4097 MGFSGHRNSLYFSIIFCCLHLDSGTATDTITSSQLIKDPETIASKSGMFTLGFFSPENSTNRYVGIWYKTRSLVVWVANRNQPLKDSSGSLTISKDGNLVVLNGQKQAVWSSNLSNNVSSNTTAQLLDSGNLVLQDATGRQVWESFLQPTDTLLPDMEIISNNKSIGVKQGISWKSPSDPSIGNFGLSLERPNVPELFIWEGIRPYWRSGPWNGRTFTGIPDMLPVYRLAGFSMVQEGDNSVLLVYTPESDDRLVVYKLDWEGKIRELIWDVKKNEWDVLWTEQQSGCEVYGMCGAYGICSVQSTPICKCLRGFQPRNVYEWDRQNMTSGCIRKTALQCGKAKGENGTVDNKRDGFLELQMVKVPDFAEWSSVSTEDACRSQCLENCTCVAYSYEAGIGCMSWSGNLIDIQQFPRGGINLYVRVANSELDKESDDKVIITVTGTVGVVIVVSSAYFLWKHLARKRKNGTNDGIFGELSRVKLHEVLLFEAEMLASATNNFNSLNKLGEGGFGPVYKGKLNDGQEIAVKRLSRASRQGLEEFMNEVLVISKLQHRNLVRLLGCCIEGDDRMLIYEYMPNKSLDTFIFGQFLKSQLKDVFYFL* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0935 601 Pfam S-locus glycoprotein domain 207 317 IPR000858 GO:0048544
Dod07g0935 601 Pfam PAN-like domain 351 410 IPR003609 -
Dod07g0935 601 ProSiteProfiles Protein kinase domain profile. 500 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g0935 601 CDD B_lectin 33 149 IPR001480 -
Dod07g0935 601 Gene3D - 23 146 IPR036426 -
Dod07g0935 601 ProSiteProfiles PAN/Apple domain profile. 339 425 IPR003609 -
Dod07g0935 601 CDD PAN_AP_plant 335 425 - -
Dod07g0935 601 SMART ntp_6 351 424 IPR003609 -
Dod07g0935 601 PANTHER - 12 594 - -
Dod07g0935 601 SUPERFAMILY alpha-D-mannose-specific plant lectins 64 180 IPR036426 -
Dod07g0935 601 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-13 12 594 - -
Dod07g0935 601 ProSiteProfiles Bulb-type lectin domain profile. 27 147 IPR001480 -
Dod07g0935 601 SUPERFAMILY Protein kinase-like (PK-like) 482 590 IPR011009 -
Dod07g0935 601 SMART blect_4 33 149 IPR001480 -
Dod07g0935 601 Gene3D Phosphorylase Kinase; domain 1 467 575 - -
Dod07g0935 601 Pfam Protein tyrosine and serine/threonine kinase 503 586 IPR001245 GO:0004672|GO:0006468
Dod07g0935 601 Pfam D-mannose binding lectin 74 175 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0935 Dod-Chr7 14448091 14450722 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0935 437 594 Receptor kinase-like Gene Family AT4G23190 46.203 1.54e-36 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dod07g0935 S_locus_glycop 9.1e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0935 - - gmx:100779455 690.263