Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0930 ATGTTGTTTACATTGCTTTTGTGTCACACACTGCAGGAAGAGATTTCAAGCCCAATCAGAGCTCAAATTTTCGAACTTTGTGACCCTGAATTGTTCCCAGAGGCTCTGCAGAATTCAGAGGTTACCTCCAGCTCAAATTGCTGCTTTGAAGAGAACTCCTCATATGCCACAAACATATCTCCAGCTTTAGATGTAGACAATAAGATCAATAGCAATAGCAATAGCAATAGTAATATAGTCACCACCCCAACTAGTACTACTACTGCACCCAGCGCCACCGTCGCTGCCACCGCCGCGACCACCAATACCAATAACAACAAAAAAAACAGCAGCAACCGGTCTGTTATCTTTGACTCCCAAGAAGAAATTAACAATGACATCTCTGCCTCCATAGACTTCTCATCATCTCCAGCTTTTTCTGTTCCCCCATTTCTCCCAATCACGACTCAGCAGGAACAATTCGACTTCTCTTCAGTGCAGCCTCAGGTTCAACTAGCAGCTGGTTCAGTTTTGAAGGGCCTCTCTCAGTACCCTGCTGATCCTGTTGTTCCGCCTCTTATGGGGGCTCCATTACCATCTGTTTTTGAAGATGACTGCATATCTTCCATCCCTTCTTATGTGCCTATTAACTCTTCATCCCCTTCTTGCTCTTATCTCAGTCCTGGTATAGGAGTATACATGCCTCCTGGACCCCTTAATGCTGCCTTATCTGCTGACAGTTCTGGCTTATTTGGTGGTACCATTCTTCTGGGTTCTGAACTGCAGACACAAGAATTGGACTATCAAGGAGAAAATGGCGGAATATATTGTACAGATTCGATTCAGCATGTGTTTAACCCGCTAGAGCTTCAGGCACTTAGTACTGAGAGTCAGCAAGTGGTAGGCGGGGCAGGGAATTCTGCCACTTTGAGACCAGAAATCTCAAACTTGGAGGACTCTACCTTAAAGGTTGGAAAACTTTCTGTTGAGCAAAGGAAGGAAAAGATTCTTAGATACATGAAGAAGAGGAATGAAAGAAATTTCGGCAAGAAAATCAAGTATGCCTGCCGCAAAACTCTGGCAGATAGCCGGCCAAGAGTAAGAGGAAGGTTTGCCAAGAATGATGACTTTGGAGAGAACCATAGACCAGCCTGTAGCAATCGTGAAGAGGATGATGAAGAAGAAATAGTTGTGAAAGAAGATGGTGATATGGTTGATTCCTCAGATATCTTTGCACATATCAGTGGAGTGAACTCCTTCAAGTGCAACTATTCCATCCAATCCTGGATTTGA 1272 0.441 MLFTLLLCHTLQEEISSPIRAQIFELCDPELFPEALQNSEVTSSSNCCFEENSSYATNISPALDVDNKINSNSNSNSNIVTTPTSTTTAPSATVAATAATTNTNNNKKNSSNRSVIFDSQEEINNDISASIDFSSSPAFSVPPFLPITTQQEQFDFSSVQPQVQLAAGSVLKGLSQYPADPVVPPLMGAPLPSVFEDDCISSIPSYVPINSSSPSCSYLSPGIGVYMPPGPLNAALSADSSGLFGGTILLGSELQTQELDYQGENGGIYCTDSIQHVFNPLELQALSTESQQVVGGAGNSATLRPEISNLEDSTLKVGKLSVEQRKEKILRYMKKRNERNFGKKIKYACRKTLADSRPRVRGRFAKNDDFGENHRPACSNREEDDEEEIVVKEDGDMVDSSDIFAHISGVNSFKCNYSIQSWI* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0930 423 Pfam CCT motif 325 367 IPR010402 GO:0005515
Dod07g0930 423 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 12 423 - -
Dod07g0930 423 MobiDBLite consensus disorder prediction 364 386 - -
Dod07g0930 423 ProSiteProfiles CCT domain profile. 325 367 IPR010402 GO:0005515
Dod07g0930 423 MobiDBLite consensus disorder prediction 364 382 - -
Dod07g0930 423 PANTHER CCT MOTIF FAMILY PROTEIN 12 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0930 Dod-Chr7 14309107 14311375 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0930 305 374 C2C2-CO-like Transcription Factor Family AT5G24930 40.000 1.72e-11 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dod07g0930 CCT 5.8e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0930 - - aprc:113871720 548.125