Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0900 ATGTTTAAAGCAGTACTGTTGATTTGCTTGCTCCTCATATGTGTATCAGCATCAGATAATGCATTTCCCAAATGTAACTGTGATGATGAGGCCAGCCTGTGGACTATTGAGAGCATTCTGGAATGCCAGAGAGTTGGCGATTTCCTGATTGCTGTGGCGTACTTCTCTATCCCCATTGAGCTTCTTTATTTCGTCAGCTGCTCGAATGTTCCGTTCAAATGGGTCCTAATTCAATTTATTGCCTTCATTGTACTTTGTGGGATGACACATTTGCTGAATGGATGGACTTATGGACCTCACACCTTCCAACTCATGGTGGCACTCACTGTCTTCAAGATTCTCACTGCATTGGTGTCGTGTGCCACTGCCATAACTCTCATCACTCTGATCCCTTTGCTTCTTAAAGTGAAGGTCAGGGAATTCATGCTGAAGAAAAAGACCTGGGATCTTGGAAGGGAGTTTGGGATTATAATGAAGCAACAGGAGGCTGCTATGCATGTAAGGATGCTTACTCAAGAGATTCGCAAGTCGCTTGATAGGCATACTATTCTGTACACCACATTGGTTGAGCTTTCGAAAACTCTGGGTTTACAAAATTGTGCAGTATGGATGCCTAATGTTGAAAGAACAGAGATGAGGCTCACACATGAATTGAATGGGAGGAATATTAATTTCTCAATGCCCATTACTGATCCAGATGTTGTAAGAATTAAGGGAAATGATATAGTAAACATAATTAATGGGGACTCGGCGCTTGCCACTACTAGCAGTGGAACTTCGGGCGAAGCAGGACCAGTTGCTGCGATCCGAATGCCAATGCTTCGGGTTTGCAATTTCAAGGGGGGAACGCCTGAGCTAATGAAGGCATGTTATGCGATATTGGTTTTGATTCTTCCGGGTGGGGAGCCTAGATCTTGGACTGTTCAAGAGCTGGAGATAATTAAGGTGGTTGCTGATCAGGTTGCTGTGGCTTTGTCTCATGCTGCAATTCTTGAAGAGTCCCAACTTATGAGAGAGAAGCTGGAGGAGCAAAATCGAGCTTTGCAGCAGGCACAAAAAGGCACTATGATGGCGAGTGGGGCCAGAGCCTCTTTTCAGAAGGTCATGAGTAATGGAATGAGAAGGCCAATGCACTCCATTCTAGGTTTGCTTTCCATGATACAGGACGAGAATTTAAAGAGTGAACAGAAAGTTATTGTTGATTCAATGCTAAGGACCAGCAATGTCCTGTCAAACTTGATAAATGATGGCATGGACAACTCGGCAAAGGATGATGGGAGATTTCCTTTGGAGATGAGATCTTTTGGGTTACATTCTTTGATAAAAGAAGCGGCTTGCCTTGCCAAGTGCATGTGTGTTCATAAGGGCCTGGGCTTTATGGTTGAGGTCGATAAGTCTCTGCCTGACAGTGTTATGGGTGATGAAAGGAGGGTTTTTCAGGTGATATTGCATATGGTTGGGAACCTAATAGATGGAAACCATGGAGGGGGGATTCTTGTGTTTCGGGTTTTCCCGGAAAGTGGTAGTCAAGGAAGGAATGATCAGGGATGGTCGACCTGGAGACCAAGCTCATCTAGTGGGGATGTATATATTAGATTTGAGATAGGGATCAATAGCATCGATTCTGAATTTGACAGTTCAGCTTCTTTTGGGCATCTCGGCGATAGGAAGGGTAGCAGTGATAGGGTTGAAGGCAGATTGAGTTTCCACATTTACAGGAGGATAGTCCAGTTGATGCAAGGGAACATATGGGTAGTACCAAACACTCAAGGTTTTCAAGGCATGGCTCTTGTTCTTCGGTTTCAAATGAGGCGGTCCATCGCCATATCCATACCCGAACCAGGAGAAAGTTCAGAGCCTTCCAATTCAAATTCCTACTTCAGAGGACTGCAAGTCTTGCTGGCTGACGATGATGATGTAAATAGAGCAGTAACCCAAAAGTTGCTTCAGAAACTTGGTTGTGTTGTAACTTCTGCTTCTTCAGGGTTTGAATGCCTTGCTGCTATTGGACCTGCTGCATCTTCCATTCAAGTTATCCTTTTGGATCTTCACATGCCCGAATTAGATGGATTCGAAGTCGCCACAAGGATTCGGAAGTTTAAAAGCCGAAATCGGCCTTTGATCATTGCCTTGACTGCAAGCAGTGAAGAGGATTTGTGGGAAAGATGCATGCAAATCGGCATTAATGGAGTTATCCGAAAGCCGGTTTTGTTGCAAGGAATCGCGAGTGAACTCCGAAGAATCCTGGCGCAGGGAAATCAAGTCCTGTGA 2271 0.4465 MFKAVLLICLLLICVSASDNAFPKCNCDDEASLWTIESILECQRVGDFLIAVAYFSIPIELLYFVSCSNVPFKWVLIQFIAFIVLCGMTHLLNGWTYGPHTFQLMVALTVFKILTALVSCATAITLITLIPLLLKVKVREFMLKKKTWDLGREFGIIMKQQEAAMHVRMLTQEIRKSLDRHTILYTTLVELSKTLGLQNCAVWMPNVERTEMRLTHELNGRNINFSMPITDPDVVRIKGNDIVNIINGDSALATTSSGTSGEAGPVAAIRMPMLRVCNFKGGTPELMKACYAILVLILPGGEPRSWTVQELEIIKVVADQVAVALSHAAILEESQLMREKLEEQNRALQQAQKGTMMASGARASFQKVMSNGMRRPMHSILGLLSMIQDENLKSEQKVIVDSMLRTSNVLSNLINDGMDNSAKDDGRFPLEMRSFGLHSLIKEAACLAKCMCVHKGLGFMVEVDKSLPDSVMGDERRVFQVILHMVGNLIDGNHGGGILVFRVFPESGSQGRNDQGWSTWRPSSSSGDVYIRFEIGINSIDSEFDSSASFGHLGDRKGSSDRVEGRLSFHIYRRIVQLMQGNIWVVPNTQGFQGMALVLRFQMRRSIAISIPEPGESSEPSNSNSYFRGLQVLLADDDDVNRAVTQKLLQKLGCVVTSASSGFECLAAIGPAASSIQVILLDLHMPELDGFEVATRIRKFKSRNRPLIIALTASSEEDLWERCMQIGINGVIRKPVLLQGIASELRRILAQGNQVL* 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0900 756 SMART REC_2 630 749 IPR001789 GO:0000160
Dod07g0900 756 Gene3D - 158 326 IPR029016 -
Dod07g0900 756 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 417 589 IPR036890 -
Dod07g0900 756 Gene3D - 425 605 IPR036890 -
Dod07g0900 756 Gene3D - 327 424 - -
Dod07g0900 756 Coils Coil 331 354 - -
Dod07g0900 756 PIRSF Ethylen_sen_hybr_HK 1 756 IPR014525 GO:0004672|GO:0005789|GO:0009723|GO:0038199|GO:0051740
Dod07g0900 756 SMART HisKA_10 361 426 IPR003661 GO:0000155|GO:0007165
Dod07g0900 756 SUPERFAMILY GAF domain-like 182 328 - -
Dod07g0900 756 Gene3D - 630 755 - -
Dod07g0900 756 ProSiteProfiles Response regulatory domain profile. 631 749 IPR001789 GO:0000160
Dod07g0900 756 Pfam GAF domain 179 325 IPR003018 GO:0005515
Dod07g0900 756 Pfam Response regulator receiver domain 632 739 IPR001789 GO:0000160
Dod07g0900 756 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 9 753 - -
Dod07g0900 756 PANTHER ETHYLENE RESPONSE SENSOR 2 9 753 - -
Dod07g0900 756 CDD REC_ETR-like 630 745 - -
Dod07g0900 756 SMART gaf_1 179 335 IPR003018 GO:0005515
Dod07g0900 756 CDD HATPase_ETR2_ERS2-EIN4-like 467 599 - -
Dod07g0900 756 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 347 426 IPR036097 GO:0000155|GO:0007165
Dod07g0900 756 CDD HisKA 361 416 IPR003661 GO:0000155|GO:0007165
Dod07g0900 756 SUPERFAMILY CheY-like 627 749 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0900 Dod-Chr7 13762225 13766734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0900 17 754 Miscellaneous Gene Families AT3G04580 57.733 0.0 822
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dod07g0900 GAF 1.7e-12 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0900 K14509 - gmx:100787425 1192.95