Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0899 ATGAACAAAAGGGGCTATCACACAGCAGACCTTTCCATAAACGAGAGCAGCAGCAGAAGTGGTGGCAACAGAGAAGATGATGAAGAGAGGGACAACTGTGATGAGCCAAAAGAGGGTGCAGTTGTTGAGGTTGGCACAAGAAGGCCAAGAGGGAGACCCCCAGGTTCCAAGAACAAGCCCAAACCACCAATCTTTGTCACTAGGGACAGCCCGAACGCTCTCAGGAGCCATGTCATGGAGGTAGCTGGAGGAGCTGATGTTGCCGAAAGCGTGGCGCAGTTTGCAAGGAGGCGCCAGCGTGGGGTTTGTGTCCTCAGTGGGAGTGGCTCCGTGGCTAATGTTACCCTCAGGCAACCAGCTGCGCCAGGAGCAGTTGTGGCGCTCCATGGCAGGTTTGAGATCCTGTCCCTAACTGGGGCGTTCTTACCTGGTCCTGCCCCTCCAGGGTCCACTGGTCTCACAGTTTACCTTGCTGGCGGGCAGGGCCAGGTTGTTGGTGGGAGTGTTGTTGGGTCATTGATTGCTGCAGGGCCGGTTATGGTCATTGCAGCAACTTTCGCTAATGCTACTTATGAGAGACTGCCACTTGAGGATGATGATGAGGGTGGCAGTGGGGGTGGCCAAGGTGGTGGTGGTGGTGGTGGTGGTGGCGGTGCTGTGGGAGGGTCTCCCCCCGGAATCGGAAGCAGTAGTGGGGGGCAGCTGCAGGCTGGGATTCCAGATCCTTCTTCTTTGCCCTTGTATAATCTGCCACCAAACTTGATCCCCAATGGAGGCCATGTGGGGCATGAAGCGTTTGCTTGGGCTCATGGAAGACCTCCTTATGGATAA 831 0.5608 MNKRGYHTADLSINESSSRSGGNREDDEERDNCDEPKEGAVVEVGTRRPRGRPPGSKNKPKPPIFVTRDSPNALRSHVMEVAGGADVAESVAQFARRRQRGVCVLSGSGSVANVTLRQPAAPGAVVALHGRFEILSLTGAFLPGPAPPGSTGLTVYLAGGQGQVVGGSVVGSLIAAGPVMVIAATFANATYERLPLEDDDEGGSGGGQGGGGGGGGGGAVGGSPPGIGSSSGGQLQAGIPDPSSLPLYNLPPNLIPNGGHVGHEAFAWAHGRPPYG* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0899 276 Gene3D - 74 202 - -
Dod07g0899 276 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 11 275 IPR014476 GO:0003680
Dod07g0899 276 ProSiteProfiles PPC domain profile profile. 71 210 IPR005175 -
Dod07g0899 276 SUPERFAMILY AF0104/ALDC/Ptd012-like 71 199 - -
Dod07g0899 276 MobiDBLite consensus disorder prediction 195 254 - -
Dod07g0899 276 CDD DUF296 75 158 IPR005175 -
Dod07g0899 276 PIRSF ESCAROLA 2 275 IPR014476 GO:0003680
Dod07g0899 276 MobiDBLite consensus disorder prediction 1 70 - -
Dod07g0899 276 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 20 11 275 - -
Dod07g0899 276 Pfam Plants and Prokaryotes Conserved (PCC) domain 75 187 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0899 Dod-Chr7 13671720 13673385 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0899 36 275 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 69.959 8.05e-99 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0899 - - mesc:110601522 353.599