Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0887 ATGAAGGATTTCCCTGGGACACCAGGCACTTTCCTTGGTTTGGTTCTTAGGATGTCTCAGTTCATTTTTGCTGTTGGGTCAATTGCTTCTATGGCTACCACATCCAGTTTCTTCAATGTCACTGCCTTTAGTTACCTGATAGCTTCAATGGGTTTGCTGGTCATTTGGAGTTTTGTACTCGCTTTATTCGATGCATATGCTTTGGTGAGAAAGAAAGCTCTCCACAACCCTGTACTGGTTAGCCTCTTCTTAGTTGGAGATTGGGTAACAGCAATACTATCTCTAGCAGCCGCTTCTGCCTCAGCTGGTGTGACCATTTTGTACTTTAACGATATCGGACACTGCCACTTTGGAGACGAATGCCAAAAGTATCAGATTTCTGCTGCTTTAGCCTTCCTGAGCTGGATATCAATCTCAATATCATCTCTAATTATGCTTTGGCTATTAGCTGCGGGGTAA 459 0.4357 MKDFPGTPGTFLGLVLRMSQFIFAVGSIASMATTSSFFNVTAFSYLIASMGLLVIWSFVLALFDAYALVRKKALHNPVLVSLFLVGDWVTAILSLAAASASAGVTILYFNDIGHCHFGDECQKYQISAALAFLSWISISISSLIMLWLLAAG* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0887 152 Pfam Casparian strip membrane protein domain 8 136 IPR006702 -
Dod07g0887 152 PANTHER CASP-LIKE PROTEIN 5B3 1 151 IPR045009 -
Dod07g0887 152 PANTHER CASP-LIKE PROTEIN 5B3 1 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0887 Dod-Chr7 13482297 13485112 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Dod07g0887 DUF588 6.2e-25 CL0396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0887 - - gmx:100789012 229.565