Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0884 ATGATGAAATCCTCCACACTTCAAATGGAACATTGTTCTTCCAACCACCTATCACCAAAATCCGATTTCTCCTCGGAATCTTCATTTGGGTCACCGGAACCGTTCACCTTGAACCTCAAGAACAACCACTTGCTTCCCTTCAACGAGAATGACCCGGAAGAGATGCTTCTCCATGGCATGATCACATCCCAACAAGCAATTCACAAGGAAGAGGAGGTAAGCTCAGATGGAAGAAGTAACACCACCACAAGGCATAATAACAATAATAAGGAGAAGGCCTATCGAGGCGTTCGGCGGCGGCCGTGGGGGAAGTTCGCGGCGGAGATAAGGGACTCCACAAGGCATGGCATGAGGGTGTGGTTGGGGACATTTGACAGTGCAGAGGAAGCAGCACTGGCTTATGACCAAGCTGCTTTTTCCATGAAGGGCTCTTCAGCCATACTCAACTTCTCTGTTGAGAGGGTGAAGGAGTCACTTAGGGAGATATATGGTTGTGGCTCAGAAGATGATGATGATGATGATCATGGTTCACCTGTGGTGGCTTTGAAGAAGAAGCACTCCATGAGGAGGAAACTGGGTGTCAAGAATAATAAGAAGAAAGATAATGATGTTAGGATAGACCATGTGGTTGTCTTGGAAGACCTAGGTGCTGAATATTTGGAACAATTATTGATGATGTCCTCTGAGAATCATAGTCCTTGGTGA 705 0.4652 MMKSSTLQMEHCSSNHLSPKSDFSSESSFGSPEPFTLNLKNNHLLPFNENDPEEMLLHGMITSQQAIHKEEEVSSDGRSNTTTRHNNNNKEKAYRGVRRRPWGKFAAEIRDSTRHGMRVWLGTFDSAEEAALAYDQAAFSMKGSSAILNFSVERVKESLREIYGCGSEDDDDDDHGSPVVALKKKHSMRRKLGVKNNKKKDNDVRIDHVVVLEDLGAEYLEQLLMMSSENHSPW* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0884 234 PANTHER DNA-BINDING DOMAIN 35 226 IPR044808 GO:0003700|GO:0009873
Dod07g0884 234 MobiDBLite consensus disorder prediction 68 94 - -
Dod07g0884 234 SUPERFAMILY DNA-binding domain 93 152 IPR016177 GO:0003677
Dod07g0884 234 PRINTS Ethylene responsive element binding protein signature 117 133 IPR001471 GO:0003700|GO:0006355
Dod07g0884 234 PRINTS Ethylene responsive element binding protein signature 94 105 IPR001471 GO:0003700|GO:0006355
Dod07g0884 234 SMART rav1_2 93 157 IPR001471 GO:0003700|GO:0006355
Dod07g0884 234 ProSiteProfiles AP2/ERF domain profile. 93 151 IPR001471 GO:0003700|GO:0006355
Dod07g0884 234 MobiDBLite consensus disorder prediction 1 32 - -
Dod07g0884 234 Gene3D AP2/ERF domain 92 153 IPR036955 GO:0003700|GO:0006355
Dod07g0884 234 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B 35 226 - -
Dod07g0884 234 CDD AP2 94 150 IPR001471 GO:0003700|GO:0006355
Dod07g0884 234 Pfam AP2 domain 94 143 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0884 Dod-Chr7 13334606 13335476 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0884 18 234 AP2-EREBP Transcription Factor Family AT3G23240 57.399 3.43e-73 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dod07g0884 AP2 6.1e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0884 K14516 - pvy:116118059 231.491