Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0870 ATGGAAAGTACAAGGCGCTGGTTTAGTAAGTTCAAGTCAAAGGACAAAATGAAGTCTGAAAAAAACAAGGAAACTATAGGCATGAGCATGACAAAAGAAGGGTCCAAACCCCCAACAAATGATGAGGCACCTTCAAAGGAAACGAAACAGAAGGTTGAAGCTGCAAAGCAATACATAGAAAACCATTATAAGAAGCAGATGCTGAGCCTGCAGGAGAGGAAGGAAAGACGTAATACACTAGAAAAAAAGTTGGCAGATGCTGAAGTCTCTGAGGAAGAGCAGAACAACTTGCTTAAGTATTTGGAGAAAAAGGAGACAGAATACATGCGTCTTCAGAGACATAAGATGGGGCCCGATGACTTTGAGCCCCTCACTATGATTGGGAAGGGTGCATTTGGAGAGGTTAGAGTCTGCCGGGAGAAGGCAACTGGTCATGTATATGCGATGAAGAAGCTTAAGAAATCAGAGATGCTTCGCAGAGGCCAAGTTGAACATGTGAAAGCTGAGAGGAACCTACTTGCAGAAGTTGACAGCAATTGCATTGTAAAACTTTATTGTTCCTTTCAAGATGAAGAGAATTTATATCTAATAATGGAGTATCTACCCGGTGGAGATATGATGACATTGCTGATGCGGAAGGATATACTGACAGAAGATGAGGCTAGGTTCTATGTTGGGGAGACTGTCCTAGCCATAGAGTCAATTCATAAACATAATTATATTCATAGAGATATCAAGCCTGACAATTTGCTGCTAGATAGAAATGGTCACATGAAATTATCAGATTTTGGATTATGCAAACCACTAGACTGCAGTAATCTTCAAGAAAAAGACTTTTCTATTGGAATTAACAGAAGTGGAGCCCTTCAGAGTGATGGACGTCCAGCAGCTCCCAAACGAACACAACAAGAGCAATTGCAGCATTGGCAGAAAAATCGGCGAATGCTTGCCTATTCTACTGTCGGGACTCCTGATTATATTGCTCCAGAAGTTCTACTGAAGAAAGGATATGGCGTGGAATGTGATTGGTGGTCTCTAGGAGCCATAATGTATGAAATGCTCGTGGGATATCCACCATTTTATTCAGATGAACCAATGTCAACGTGTAGAAAGATTGTAAATTGGAGAACTCATTTAAAATTTCCTGAAGAAGCTAAACTATCAGCGGAGGCAAAGGATCTTATCTGTAGACTCCTTTGTAATGTTGAGCAGAGGCTTGGAACCAAAGGAGCTGACGAAATAAAGGCTCACCCATGGTTCAAAGGTATTGAATGGGATAAATTGTACCAAATGAAAGCTGCTTTTATACCTGAGGTCAATGATGAATTAGATACTCAGAATTTTGAGAAGTTTGAAGAGGTGGAGAAGCAAACTGAAACTTCCTCAAAGGCAGGCCCGTGGAGAAAGATGTTGCCATCTAAAGATATTAACTTTGCTGGTTATACATACAAGAATTATGAAATTGTGAAGGATCATGAACTACCTGGAATTGCTGAATTGAAGAGGAGCACAAAACCTAAAAGGCCATCTATTAAAGCCTTATTTGATGATGAATCGGCTATGGGTGCTAATCAACCTGTCAAAGGGAGCTTCTTAAATCTCTTACCTCCTCAAATGGAAGTTCCTGAGAAAAGTGAATCACAATGA 1647 0.4044 MESTRRWFSKFKSKDKMKSEKNKETIGMSMTKEGSKPPTNDEAPSKETKQKVEAAKQYIENHYKKQMLSLQERKERRNTLEKKLADAEVSEEEQNNLLKYLEKKETEYMRLQRHKMGPDDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDEENLYLIMEYLPGGDMMTLLMRKDILTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGINRSGALQSDGRPAAPKRTQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGVECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSAEAKDLICRLLCNVEQRLGTKGADEIKAHPWFKGIEWDKLYQMKAAFIPEVNDELDTQNFEKFEEVEKQTETSSKAGPWRKMLPSKDINFAGYTYKNYEIVKDHELPGIAELKRSTKPKRPSIKALFDDESAMGANQPVKGSFLNLLPPQMEVPEKSESQ* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0870 548 Pfam Protein kinase domain 123 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g0870 548 ProSitePatterns Serine/Threonine protein kinases active-site signature. 240 252 IPR008271 GO:0004672|GO:0006468
Dod07g0870 548 SMART serkin_6 121 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g0870 548 Gene3D Transferase(Phosphotransferase) domain 1 319 438 - -
Dod07g0870 548 MobiDBLite consensus disorder prediction 1 27 - -
Dod07g0870 548 MobiDBLite consensus disorder prediction 504 548 - -
Dod07g0870 548 Pfam Protein kinase C terminal domain 439 483 IPR017892 GO:0004674|GO:0005524|GO:0006468
Dod07g0870 548 Gene3D Transferase(Phosphotransferase) domain 1 205 270 - -
Dod07g0870 548 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 43 522 - -
Dod07g0870 548 SUPERFAMILY Protein kinase-like (PK-like) 95 468 IPR011009 -
Dod07g0870 548 SMART pkinase_C_6 421 485 IPR000961 GO:0004674|GO:0005524|GO:0006468
Dod07g0870 548 CDD STKc_NDR_like 119 484 - -
Dod07g0870 548 ProSitePatterns Protein kinases ATP-binding region signature. 127 150 IPR017441 GO:0005524
Dod07g0870 548 ProSiteProfiles AGC-kinase C-terminal domain profile. 421 493 IPR000961 GO:0004674|GO:0005524|GO:0006468
Dod07g0870 548 MobiDBLite consensus disorder prediction 39 54 - -
Dod07g0870 548 Gene3D Phosphorylase Kinase; domain 1 439 449 - -
Dod07g0870 548 ProSiteProfiles Protein kinase domain profile. 121 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g0870 548 Gene3D Phosphorylase Kinase; domain 1 119 204 - -
Dod07g0870 548 PANTHER SERINE/THREONINE-PROTEIN KINASE 43 522 - -
Dod07g0870 548 Coils Coil 70 97 - -
Dod07g0870 548 MobiDBLite consensus disorder prediction 1 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0870 Dod-Chr7 12883133 12897550 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0870 1 546 AGC Kinase Gene Family AT3G23310 80.146 0.0 889
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Dod07g0870 Pkinase 5.5e-65 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2545 01 64658408 64664117 Dod07g0870 07 12883133 12897550 PCT