Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0852 ATGGCTGAAAGAGAAGCAGTAGGAAGGTCGGGTGGCACAGCAGCTTCGGAGATGTCTCTGAAGGATCAGGGCAACGAGTTCTTCAAGTCGGGCAAGTATCTCAAAGCTGCCGCTCTCTACACTCAAGCCATCAAGCAAGACCCTTCAAACCCTACTCTCTATAGTAATCGTGCTGCAGCATTACTGCAATTGGATAAGCTTAACAAAGCTCTTGATGATGCCGAGATGACAATTAAATTAAAACCCCAATGGGAAAAGGGATATTTCAGGAAGGGAAGCATATTGGAGGCCATGAAGCGATATGATGATGCGTTGGCTGCCTTTGAGATTTCTTTGCAGTATAACCCACAAAGTCAAGAAGTATCAAAAAAGATAAAGAAGATAAACCAACTATTGAAAGATAGCAAGCGAGCTCAAGAAGTGGAAACTATGAGATCTAATGTTGACATGGCCAAACATTTACATACATTGAAATCTGAATTGTCTGGAAAGTATGGATCTGAAGAATGCTGGAAAGAAATGTTTGATTTTCTTGTTGAGACTATGGAGACTGCTGTAAAATCATGGCATGAAACTTCTACAGTGGATGCTAGAGTTTACTTTCTTCTTGATAAGGACAAGACACAGACCGATAAGTATGCTCCAGTTGTGAATATTGATAAGGCCTTTGAATCACCACATACACACAGCAATTGCTTTTCATTTCTTAGGCAGTACGCTGAGGAGTCTTTCTCCAAAGCAGCCTGCTTAGTGACTCCCAAAAGCATCATTGCTTATCCACAGGTTTGGAAAGGCCAAGGATCAAGAAAGTGGAAACATGCACAAAATGATGGTTTCTTTGTTCAATTCGAGACACCTTACCTGCGAAAGTTGTGGTTTATTCCAAGTTCTAATGGAAAGGGACAGACATTGTGCAGGGACCCAGAGGTTCTGGACATAGGAGCCCATGAAATTCTTCCGCGATTATTCAAAGAAAAGCTGCCCAGTTCTTAG 993 0.4189 MAEREAVGRSGGTAASEMSLKDQGNEFFKSGKYLKAAALYTQAIKQDPSNPTLYSNRAAALLQLDKLNKALDDAEMTIKLKPQWEKGYFRKGSILEAMKRYDDALAAFEISLQYNPQSQEVSKKIKKINQLLKDSKRAQEVETMRSNVDMAKHLHTLKSELSGKYGSEECWKEMFDFLVETMETAVKSWHETSTVDARVYFLLDKDKTQTDKYAPVVNIDKAFESPHTHSNCFSFLRQYAEESFSKAACLVTPKSIIAYPQVWKGQGSRKWKHAQNDGFFVQFETPYLRKLWFIPSSNGKGQTLCRDPEVLDIGAHEILPRLFKEKLPSS* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0852 330 Coils Coil 57 77 - -
Dod07g0852 330 ProSiteProfiles TPR repeat profile. 17 50 IPR019734 GO:0005515
Dod07g0852 330 PANTHER STRESS-INDUCED-PHOSPHOPROTEIN 1 19 325 - -
Dod07g0852 330 ProSiteProfiles TPR repeat profile. 85 118 IPR019734 GO:0005515
Dod07g0852 330 SUPERFAMILY TPR-like 19 128 IPR011990 GO:0005515
Dod07g0852 330 Gene3D Tetratricopeptide repeat domain 16 131 IPR011990 GO:0005515
Dod07g0852 330 PANTHER TPR REPEAT CONTAINING PROTEIN 19 325 IPR045248 GO:0006457|GO:0030544|GO:0051879
Dod07g0852 330 Pfam Tetratricopeptide repeat 87 117 IPR019734 GO:0005515
Dod07g0852 330 SMART tpr_5 17 50 IPR019734 GO:0005515
Dod07g0852 330 SMART tpr_5 51 84 IPR019734 GO:0005515
Dod07g0852 330 SMART tpr_5 85 118 IPR019734 GO:0005515
Dod07g0852 330 Pfam TPR repeat 24 64 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0852 10 146 U-box Gene Family AT3G07370 25.180 9.65e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0852 - - gmx:100775252 587.8