Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0841 ATGGCCGCAGCAGCAGTACGCCCCCTCGTCACCATCCAACCCTTGGAAGGCGACATGGCCACCGACGCCCTACCAACCGCCCCCTTACCTGACGTGATGAAGGCCGCAATCCGCCCCGACATCGTCACCTTCGTCCACGACAACATCTCCAAGAACTCCCGTCAGCCCTACGCCGTCAGCCGCCGCGCCGGCCACCAGACCTCCGCCGAGTCCTGGGGAACCGGCCGCGCCGTCTCCCGTATCCCCCGCGTACCCGGCGGCGGCACCCACCGCGCCGGCCAGGGAGCCTTCGGCAACATGTGCCGCGGCGGCCGCATGTTCGCACCAACCAAGATCTGGCGCCGCTGGCACCGCAAGATCAACGTCAACCAGAAGCGCCACGCCGTTGTCTCCGCCATCGCCGCCTCCGCCGTCCCCTCCCTCGTCGTTGCCCGCGGCCACCGCATCGACTCCGTCCCCGAGCTGCCCCTCGTCGTCAGCGACGCCGCGGAGGGAGTCGAGAAGACGAAGGAGGCGATCAAGGTTCTCAAGAACGTCGGCGCCTACGCCGACGCCGAGAAAGCGAAGGACAGCCACGCGATTCGCCCTGGCAAGGGGAAAATGCGTAACCGTCGCTACATTTCCCGAAAGGGACCTCTCATCGTTTACGGAACCGAAGGCGCGAAGGCCGTCAAGGCCTTCAGGAACATACCTGGAGTCGAGGTTGCGAACGTGGAGAGGCTCAATTTGCTCAAGCTTGCTCCTGGTGGTCACCTTGGGAGGTTTGTTGTTTGGACCAAATCTGCTTTTGAGAAATTGGATTCGATTTACGGTTCGTTTGATAAGGCTTCGGAGAAGAAGAAGGGGTATTTGTTGCCGAGGGCGAAGATGGTGAATGCTGATTTGGCTAGGATTATTAACTCTGATGAGGTTCAGTCTGTTGTGAGGCCTATTAAGAAGGAGGTTAAGAGGGCCACTCTGAAGAAGAACCCGCTTAAGAACCTTAATGTGATGCTGAAGCTGAATCCTTATGCTAAGACTGCTAGGAGGATGGCTTTGCTTGCTGAGGCGGAGCGTGTTAAGGCGAAGAAGGAGAAGCTTGATAAGAAGAGGAAGACTACTGTCTCCAAGGAGGAAGCTTCTACAATCAAGGCTGCTGGAAAAGCATGGTATCAAACTATGGTGTCCGACTCTGATTACACAGAATTTGATAACTTTTCTAAGTGGTTGGGCGTTTCACAGTGA 1224 0.5768 MAAAAVRPLVTIQPLEGDMATDALPTAPLPDVMKAAIRPDIVTFVHDNISKNSRQPYAVSRRAGHQTSAESWGTGRAVSRIPRVPGGGTHRAGQGAFGNMCRGGRMFAPTKIWRRWHRKINVNQKRHAVVSAIAASAVPSLVVARGHRIDSVPELPLVVSDAAEGVEKTKEAIKVLKNVGAYADAEKAKDSHAIRPGKGKMRNRRYISRKGPLIVYGTEGAKAVKAFRNIPGVEVANVERLNLLKLAPGGHLGRFVVWTKSAFEKLDSIYGSFDKASEKKKGYLLPRAKMVNADLARIINSDEVQSVVRPIKKEVKRATLKKNPLKNLNVMLKLNPYAKTARRMALLAEAERVKAKKEKLDKKRKTTVSKEEASTIKAAGKAWYQTMVSDSDYTEFDNFSKWLGVSQ* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0841 407 ProSitePatterns Ribosomal protein L1e signature. 121 147 IPR013000 -
Dod07g0841 407 Coils Coil 343 363 - -
Dod07g0841 407 MobiDBLite consensus disorder prediction 56 95 - -
Dod07g0841 407 PANTHER 60S RIBOSOMAL PROTEIN L4 3 407 IPR045240 -
Dod07g0841 407 MobiDBLite consensus disorder prediction 56 74 - -
Dod07g0841 407 Gene3D - 4 309 IPR023574 GO:0003735|GO:0005840|GO:0006412
Dod07g0841 407 PANTHER BNAC03G35890D PROTEIN 3 407 - -
Dod07g0841 407 Pfam 60S ribosomal protein L4 C-terminal domain 281 353 IPR025755 -
Dod07g0841 407 SUPERFAMILY Ribosomal protein L4 22 268 IPR023574 GO:0003735|GO:0005840|GO:0006412
Dod07g0841 407 Pfam Ribosomal protein L4/L1 family 28 267 IPR002136 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0841 Dod-Chr7 12226105 12228687 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0841 1 407 Cytoplasmic Ribosomal Protein Gene Family AT3G09630 82.064 0.0 678
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0841 K02930 - gmx:100779764 706.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2690 01 66353835 66355763 Dod07g0841 07 12226105 12228687 PCT