Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0839 ATGTCCGCAACCACCAACGTAGTTGTTCTGGACAACGGCGGCGGCCTTATCAAAGCGGGGTTGGGCGGCGAACGCGACCCCTCCGTCATTCTCCCCAACTGCCTCTACCGCTCCCCCGCCTCCAAAAAATGGCTCCACCCAAACCCTCTAAGCCCAACCACAACCACCGCCGACTCCTCCTCCTCCGAGCCGGACCTGACCTCCGCCGCCGTCCGCCGCCCCATGGACCGCGGCTACCTAATCAACGCAGACCTCCAGCGCGAAATCTGGTCCCACCTCTTCTCCTCCATCCTCCGCATAAACCCATCCCACTCCTCCTTACTCCTCACCGAGCCCCTTTTCACCGTCCCCTCCATCCAGCGGTCCCTGGACGAGCTCGTCTTCGAAGACTTCAACTTCAGGTCCCTCTACGTGGCAGACTCCCCCTCCCTCGTCCATCTCTACGAGGCCAGCCGCAGGCCCGATGGGCTTGTGTCCCGGGCCCAGTGCAGCCTCGTTGTTGACTCCGGGTTCTCCTTCACCCATGCCTCCCCTGTCTTCCAGAACTTCACCCTCAATTACGCCGTCAAGAGGATCGACTTGGGTGGCAAGGCCCTCACCAATTACCTCAAGGAGCTCGTCTCCTTTCGCTCTGTTAATGTCATGGAGGAGACCTTCATCATCGATGATGTCAAGGAGAAGCTCTGCTTCGTCTCCCTCGATGTGCCCCGCGACCTCCGGATAGCTAGGGAAAGCGGAAAAGAGAATCTCTTTAGGTGCACATATGTGCTTCCGGACGGTGTCACATACACCAAAGGTTTTGTTAAATATCCAGATCAAGCACGCAGATATCTTGCTTTGACGGACGGTGGTTTTCCTACTCCGGTGGAAACAAAGGGGGATATGAATTGCCCAGAAATTGCTGCTGGGCTGCCTGAAGACAGAAAGAGAATCGATTTGTCAAAAAATGAATTTGACTTGACAAACGAACGGTTTCTTGTCCCGGAGATGATCTTCCATCCTGCGGATTTGGGAATGAATCAGGCTGGGCTAGCAGAATGTATTGTTAGAGCTGTTAATTCCTGCCACCCACATCTGCACCCTGTACTCTATGAAAGCATCATTTTAACCGGTGGAAGCACTTTATTTCCTCAGTTTGCTGAGAGATTAGAGAAGGAGCTCCGGCCTTTAGTTCCAGATGACTATCATGTGAAGATAACTACTCAAGAAGATCCCATACTAGGTGTTTGGTGTGGAGGGTCGCTATTGGCATCAAGCCCAGATTTTGAAGCAATGTGTGTGACCAAGTCTGAGTATGAGGAGCTTGGTTCTGCTAGATGTCGAAAGAGATTCTTTCATTAA 1341 0.5317 MSATTNVVVLDNGGGLIKAGLGGERDPSVILPNCLYRSPASKKWLHPNPLSPTTTTADSSSSEPDLTSAAVRRPMDRGYLINADLQREIWSHLFSSILRINPSHSSLLLTEPLFTVPSIQRSLDELVFEDFNFRSLYVADSPSLVHLYEASRRPDGLVSRAQCSLVVDSGFSFTHASPVFQNFTLNYAVKRIDLGGKALTNYLKELVSFRSVNVMEETFIIDDVKEKLCFVSLDVPRDLRIARESGKENLFRCTYVLPDGVTYTKGFVKYPDQARRYLALTDGGFPTPVETKGDMNCPEIAAGLPEDRKRIDLSKNEFDLTNERFLVPEMIFHPADLGMNQAGLAECIVRAVNSCHPHLHPVLYESIILTGGSTLFPQFAERLEKELRPLVPDDYHVKITTQEDPILGVWCGGSLLASSPDFEAMCVTKSEYEELGSARCRKRFFH* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0839 446 CDD NBD_sugar-kinase_HSP70_actin 8 206 - -
Dod07g0839 446 Gene3D Actin; Chain A, domain 4 315 341 - -
Dod07g0839 446 Gene3D - 342 408 - -
Dod07g0839 446 Gene3D - 139 199 - -
Dod07g0839 446 Gene3D Actin; Chain A, domain 4 200 259 - -
Dod07g0839 446 MobiDBLite consensus disorder prediction 47 67 - -
Dod07g0839 446 Pfam Actin 4 445 IPR004000 -
Dod07g0839 446 SUPERFAMILY Actin-like ATPase domain 5 147 IPR043129 -
Dod07g0839 446 MobiDBLite consensus disorder prediction 46 68 - -
Dod07g0839 446 ProSitePatterns Folylpolyglutamate synthase signature 2. 16 31 IPR018109 GO:0004326|GO:0005524|GO:0009396
Dod07g0839 446 Gene3D - 409 437 - -
Dod07g0839 446 Gene3D Actin; Chain A, domain 2 35 74 - -
Dod07g0839 446 SUPERFAMILY Actin-like ATPase domain 162 445 IPR043129 -
Dod07g0839 446 PANTHER ACTIN-RELATED PROTEIN 6 8 442 IPR030054 GO:0005634|GO:0006338
Dod07g0839 446 Gene3D - 8 138 - -
Dod07g0839 446 PANTHER ACTIN 8 442 IPR004000 -
Dod07g0839 446 SMART actin_3 5 445 IPR004000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0839 Dod-Chr7 12189745 12193174 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0839 8 445 Cytoskeleton Gene Families AT1G49240 27.500 3.05e-56 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0839 K11662 - gmx:100819827 736.873