Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0829 ATGACAAGGGGTGTCCAGATGAGTGCCGACGGCGAAGAGCTGAAGAAGTTGAATGAGCGATTGCAAGATGGGAGGAAGGCCTTTCAGGATGGATTTTCGGGTGAGGGACAAGGTTTATGCAAGGATGAAGGAGTAAAATGTAATGGAGTTGTTGAAGAAGTTAAGGCTGTGGCGGGGGGAACTGTGGAGTTCCCCTCTGTCCAGCAGCATGTGCCACAGCAACAGCCTCAAGGGGCAACGATTTGTTGGGAGAGGTTTCTGCATATTAGATCTCTCAAGGTCTTGCTTGTGGAGAATGATGATTCTACTCGCCATGTTGTTACCGCATTGCTCCGCAATTGTAGTTATGAAGTTATTGAAGCAGCAAATGGATTGCAGGCTTGGAAGTTATTGGAGGATTTAACCAATCATATTGATCTTGTGTTAACTGAGGTAGCAATGCCTAGCTTATCAGGCATTGGTCTTTTACACAAGATTATGAGCCACAAAACACGGAAAAACATTCCAGTAATTATGATGTCATCTCTTGACTCTATGGGTTTAGTCTTTAAGTGTTTGTCAAAGGGTGCTGTCGACTTTCTAGTTAAACCCATACGGAAGAATGAGCTTAAAAACCTTTGGCAGCATGTTTGGAGGAGATGCCATAGTTCTAGTGGCAGTGGCAGTGGCAGTGAAAGTGGCACACAAACCCAGAAGTCAGTAAAATCAAAGAGTCTTGAGAAGTCTAATAATAATTCTGGAAGCAATGACGAGGAAGATAATGGAAGTGTAGGCCTGAGTATTGGGGATGGAAGTGACAATGGCAGCGGCACTCAGAGCTCCTGGACCAAACAAGCTGTAGAAGTTGACAGTCCCAAACCAAGTTCCCAGTGGGATCAAATAGCTGAGTGTCCTGATAGCACATGTGCTCAAGTTGTTCGTTCAAATGCTGAAATATGTGGTAAAAAGGTGGTTCCTCTATCCACAAAGGATTATCCAGAACACAAAGAACAACATGTCAAAACTACAGGTTCAAAACATAGCACCCCACTTGATGTAGGCCTCTCTAAATTCAATGAGCAAAGTAGAGGACAGCTGGACCTTAATTGTGAGAATCAATCTAGCAAGCCTAGTGGCAAAGGTCTTTCACTGTCTGATGCCATTACTAGCACTTATGATTCTCAGATGCATGGAGGAGAATTTGAAGCCCTGAATAGAAGACCCAGGTCCTCAGATATTGAAAATAAAGGCATCAGTAATGATGAAGACTTGCCATCTCTTGAGCTCAGTTTAAAGAGGCTTAGAGGAGTCAAAGATGCTGGCATTACAATTCAGGATGAACGGAATGTTTTAAGACGTTCTGACCTTTCTGCCTTCTCAAGGTATAATGCGGCCTCTAACACTAATAAGTCTCCCACTGGATGTGCTGGAAGCAATTCTCCTCAGAATAATAGCTTAGAAGTTACAAAGAAAGATTCATCTCGTGACATTCAGTCTCATTCTAGTGGCAATCCTCCTAACCAGAATTCAAATGGTGCTAGCAACAATATTGATATGGGTTCGACTACTAATAATGCTTTTGCTAAATCTGCAGTCATAAGTGAGCCAGCAGTGGCATCAACAACTGAAAATTTGTACCAATCATCTGCTTTCCAGCCAATAAAGAACAACATTAAAATTACCTCTCAAACAGTTGTGTCACATAATCCTGAAGATACTACGGCAACAATGCTGGCACCACCCAAAGTAGACACACACAAGGATTTGGCAACTCAGGACTTCCATCGTCATTATGAAAACCATAACTGCATTCCTAACAACATGAAGCACCAGCTGCAACCCGATCATGATGCTGAATCATTAAAGAAAATGGCTTCTGCTGCTCCACATTGTGGGTCGTCAAATGTGGTTGAGGTGCTAGGTGAAGGTATTATTGGAAATTATAGTGTCAATAGAAGTGCTTCAGGCAGCAACAATGGAAGCAATGGACAAAATGGGAGTAGCACAGCAGTTAATGCTGGAGGGACAAACAGAGAAAGCAATAATGGACTCACTGGGAATAGTGGCAGTGGTGATGCTAGTGGGAGTGGAAGTGCCAACAGAGTAGATCAAAACAAGAGTTCTCACAGGGAAGCAGCCTTAACTAAATTCCGCCAGAAGAGAAAGCAAAGAAAGGAGAGGTGCTTTCATAAAAAGGTTCGATATCAAAGCCGGAAGAAATTAGCTGAACAACGTCCTCGATTTCGCGGGCAATTTGTGCGACAGTCCTCGAATGAAAATGCAAGTGAGGCAACGGATAACTGA 2283 0.4314 MTRGVQMSADGEELKKLNERLQDGRKAFQDGFSGEGQGLCKDEGVKCNGVVEEVKAVAGGTVEFPSVQQHVPQQQPQGATICWERFLHIRSLKVLLVENDDSTRHVVTALLRNCSYEVIEAANGLQAWKLLEDLTNHIDLVLTEVAMPSLSGIGLLHKIMSHKTRKNIPVIMMSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSGSESGTQTQKSVKSKSLEKSNNNSGSNDEEDNGSVGLSIGDGSDNGSGTQSSWTKQAVEVDSPKPSSQWDQIAECPDSTCAQVVRSNAEICGKKVVPLSTKDYPEHKEQHVKTTGSKHSTPLDVGLSKFNEQSRGQLDLNCENQSSKPSGKGLSLSDAITSTYDSQMHGGEFEALNRRPRSSDIENKGISNDEDLPSLELSLKRLRGVKDAGITIQDERNVLRRSDLSAFSRYNAASNTNKSPTGCAGSNSPQNNSLEVTKKDSSRDIQSHSSGNPPNQNSNGASNNIDMGSTTNNAFAKSAVISEPAVASTTENLYQSSAFQPIKNNIKITSQTVVSHNPEDTTATMLAPPKVDTHKDLATQDFHRHYENHNCIPNNMKHQLQPDHDAESLKKMASAAPHCGSSNVVEVLGEGIIGNYSVNRSASGSNNGSNGQNGSSTAVNAGGTNRESNNGLTGNSGSGDASGSGSANRVDQNKSSHREAALTKFRQKRKQRKERCFHKKVRYQSRKKLAEQRPRFRGQFVRQSSNENASEATDN* 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0829 760 Pfam Response regulator receiver domain 94 205 IPR001789 GO:0000160
Dod07g0829 760 MobiDBLite consensus disorder prediction 491 515 - -
Dod07g0829 760 MobiDBLite consensus disorder prediction 325 345 - -
Dod07g0829 760 SUPERFAMILY CheY-like 90 215 IPR011006 -
Dod07g0829 760 Pfam CCT motif 703 748 IPR010402 GO:0005515
Dod07g0829 760 MobiDBLite consensus disorder prediction 648 696 - -
Dod07g0829 760 MobiDBLite consensus disorder prediction 648 760 - -
Dod07g0829 760 PANTHER TWO-COMPONENT RESPONSE REGULATOR-LIKE PRR37 72 737 - -
Dod07g0829 760 SMART REC_2 92 207 IPR001789 GO:0000160
Dod07g0829 760 ProSiteProfiles Response regulatory domain profile. 93 211 IPR001789 GO:0000160
Dod07g0829 760 Gene3D - 91 248 - -
Dod07g0829 760 ProSiteProfiles CCT domain profile. 706 748 IPR010402 GO:0005515
Dod07g0829 760 PANTHER TWO-COMPONENT RESPONSE REGULATOR 72 737 IPR045279 GO:0009736
Dod07g0829 760 MobiDBLite consensus disorder prediction 217 293 - -
Dod07g0829 760 MobiDBLite consensus disorder prediction 708 731 - -
Dod07g0829 760 CDD psREC_PRR 94 197 - -
Dod07g0829 760 MobiDBLite consensus disorder prediction 458 515 - -
Dod07g0829 760 MobiDBLite consensus disorder prediction 458 481 - -
Dod07g0829 760 MobiDBLite consensus disorder prediction 393 415 - -
Dod07g0829 760 MobiDBLite consensus disorder prediction 743 760 - -
Dod07g0829 760 MobiDBLite consensus disorder prediction 390 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0829 Dod-Chr7 11917888 11939672 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0829 168 750 Response Regulator Gene Family AT5G02810 46.965 1.59e-108 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Dod07g0829 Response_reg 5e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0829 K12129 - gmx:100796933 1113.98