Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0828 ATGGATTGGATTCCATGTTCTGGAAGTTCAAACACTAAGAAGAAGCTAAAGAAGAAGCTGGAGAAGATGGAAGTGCAAGGAAGTGTTAAGGTTGATCCCATAAAAGCGAAACCAGGGAAACTAAATAGGAATTCATCCACGAAATCCAAAGATTGCTCTAAAAATGGGAACCATGATCACATTGCTGCAAAGACATTCTCGTTCCGCGAGTTGGCAACTGCAACTAGAAATTTTAGAGCAGAATGTCTTTTGGGTGAAGGAGGCTTTGGTAGAGTATACAAAGGGCGTTTGGAAAATATTAATCAGATTGTTGCAATCAAACAACTTGACCGAAATGGGCTGCAAGGGAACAGAGAGTTCCTAGTTGAAGTGTTGATGTTAAGTCTTCTTCACCACCGTAACCTTGTCAACCTGATAGGCTATTGTGCTGATGGGGATCAAAGGCTTCTAGTTTATGAATATATGCCGTTGGGATCCTTGGAAGACCACTTACATGATGTTGGTCCTGGCAAGAAACAACTTGATTGGAACACACGAATGAAAATAGCTGCCGGGGCAGCAAAGGGATTGGAATATCTACATGACAAAGCTAACCCTCCTGTCATATACCGAGATTTAAAGTCCTCCAACATTTTGCTTGATGAAAGGTATCATCCAAAGTTGTCTGATTTTGGTTTGGCTAAGCTTGGCCCAGTCGGGGAAAACACCCATGTATCAACAAGGGTTATGGGCACCTATGGATATTGTGCTCCAGAGTATGCAATGACTGGTCAACTGACTTTGAAATCAGATGTGTATAGCTTTGGCGTTGTTCTTCTGGAAATAATTACCGGAAGGAAGGCAATTGACAATTCCAAATCTGCTGGAGAGCAGAATCTTGTCGCATGGGCTAGACCTTTGTTCAAGGAACGAATAAAATTTTCACAAATGGCTGATCCAATGCTCCAAGGCCAATATCCTCCAAGAGGGCTATACCAGGCCCTTGCTGTTGCTGCAATGTGTGTTCAGGAGCAAGCCAATATGCGTCCAGTAATAGCTGATGTTGTTACAGCTTTGAGTTACCTTGCTTCACAAAGATATGACCCCAATACAGAGACAGTGCAAAGCTCCCGCCTCACACCCAGCACTCCTCCTAGAACCAAGAGAGGACAATGA 1155 0.4329 MDWIPCSGSSNTKKKLKKKLEKMEVQGSVKVDPIKAKPGKLNRNSSTKSKDCSKNGNHDHIAAKTFSFRELATATRNFRAECLLGEGGFGRVYKGRLENINQIVAIKQLDRNGLQGNREFLVEVLMLSLLHHRNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLHDVGPGKKQLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKSSNILLDERYHPKLSDFGLAKLGPVGENTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDNSKSAGEQNLVAWARPLFKERIKFSQMADPMLQGQYPPRGLYQALAVAAMCVQEQANMRPVIADVVTALSYLASQRYDPNTETVQSSRLTPSTPPRTKRGQ* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0828 384 CDD STKc_IRAK 84 352 - -
Dod07g0828 384 SMART serkin_6 78 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g0828 384 Gene3D Transferase(Phosphotransferase) domain 1 155 373 - -
Dod07g0828 384 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL7-RELATED 1 382 - -
Dod07g0828 384 ProSitePatterns Protein kinases ATP-binding region signature. 84 107 IPR017441 GO:0005524
Dod07g0828 384 MobiDBLite consensus disorder prediction 27 56 - -
Dod07g0828 384 MobiDBLite consensus disorder prediction 363 384 - -
Dod07g0828 384 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Dod07g0828 384 Pfam Protein kinase domain 82 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g0828 384 PANTHER OS07G0668900 PROTEIN 1 382 - -
Dod07g0828 384 SUPERFAMILY Protein kinase-like (PK-like) 64 370 IPR011009 -
Dod07g0828 384 ProSiteProfiles Protein kinase domain profile. 78 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g0828 384 Coils Coil 6 26 - -
Dod07g0828 384 Gene3D Phosphorylase Kinase; domain 1 48 154 - -
Dod07g0828 384 PIRSF ILK 11 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0828 Dod-Chr7 11872711 11876811 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0828 38 357 Glycoside Hydrolase AT3G07070 69.062 1.05e-166 471
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Dod07g0828 Pkinase 6.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0828 - - gmx:100776041 692.189