Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0819 ATGGAACCCCAGCTTATACACCACCCCACGTCTTCACCAGGAAAAAGCAGCACAACAATTACCATCGCCGTAACAGTACCAATCGGCGTTGCTGTGATTGTGCTGAGTTTTATCATTTATATAAGAGTGAGGAAGTCAAAGACAAACTTCGAAACGCTAGAAGATGAAGATATTAAAATTGTTGAGTCATTGCAATTTAACTTGGAGACAATACGAGATGCTACAAATGACTTCTCTGATTCTAATAAACTTGGACAAGGTGGATTCGGGGCTGTTTATAAGGGTACACTCTCCAACGGACAAGAGATTGCTGTCAAAAGGTTGGCAAGGAATTCTGGTCAAGGAGATTTAGAATTTAAGAATGAGGTGCTTTTAGTGGCTAAGCTTCAACATCGAAATTTAGTTAGACTACTTGGTTTCTGTCTAGAAGGAAGAGAAAGGTTACTCGTCTATGAATTTGCTCCCAATAAAAGTCTTGATTACTTCATATTTGATCCAACCAAGAGAGCCCAATTTGACTGGGAAAGCCGATACAAGATCATTGGAGGTATTGCTCGAGGCCTTGTTTATCTTCATGAAGATTCTCGACTACGCATTATTCATCGTGATCTCAAAGCCGCCAACATTCTCTTGGATGAAGAGATGAATCCTAAGATATCAGATTTTGGCACAGCAAGACTTTTTGTTATGGATCAAACACATTCGGATACAAATAGAATTGTTGGAACCTATGGATATATAGCACCTGAGTATGGATTGTATGGACAATTTTCAATGAAGTCAGACGTCTTTAGTTTTGGCGTACTAGTTCTTGAGATTATATGTGGCAAGAAGAACCTTCCCAATGATCATCATATGGAGAATTTGACGAGCTTTGCATGGAGAAACTGGAGGGAGGGGACAGCTACAAATATTGCAGATCCCACACTGAATAATTATTCACAAAATGAAATAATCACATGCATCCATATTGCTTTGCTCTGTCTTCAAGAAAATGTAGAAGACAGACCAACCATGGCTACCATTTTACTCATGCTTAATAGCTCTTCTATGACTCTCCCGGTACCTTCAGAACCTGCATTTTTTGTGAATAGTAGAACAGGAAACCTTCTAGCGATACAATCAGGGGAATATAACTCAGGGGAAACAAGTTCAGACAAATCTGCAAGTGGACCAGCACAAAATTCAAGCAATGAAGCTCCAATTACTGAGCTATTTCCTCGCTAG 1227 0.3961 MEPQLIHHPTSSPGKSSTTITIAVTVPIGVAVIVLSFIIYIRVRKSKTNFETLEDEDIKIVESLQFNLETIRDATNDFSDSNKLGQGGFGAVYKGTLSNGQEIAVKRLARNSGQGDLEFKNEVLLVAKLQHRNLVRLLGFCLEGRERLLVYEFAPNKSLDYFIFDPTKRAQFDWESRYKIIGGIARGLVYLHEDSRLRIIHRDLKAANILLDEEMNPKISDFGTARLFVMDQTHSDTNRIVGTYGYIAPEYGLYGQFSMKSDVFSFGVLVLEIICGKKNLPNDHHMENLTSFAWRNWREGTATNIADPTLNNYSQNEIITCIHIALLCLQENVEDRPTMATILLMLNSSSMTLPVPSEPAFFVNSRTGNLLAIQSGEYNSGETSSDKSASGPAQNSSNEAPITELFPR* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0819 408 ProSiteProfiles Protein kinase domain profile. 78 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g0819 408 Gene3D Phosphorylase Kinase; domain 1 40 153 - -
Dod07g0819 408 ProSitePatterns Protein kinases ATP-binding region signature. 84 106 IPR017441 GO:0005524
Dod07g0819 408 CDD STKc_IRAK 84 347 - -
Dod07g0819 408 SMART serkin_6 78 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g0819 408 MobiDBLite consensus disorder prediction 375 402 - -
Dod07g0819 408 SUPERFAMILY Protein kinase-like (PK-like) 64 370 IPR011009 -
Dod07g0819 408 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 12 391 - -
Dod07g0819 408 Pfam Protein kinase domain 79 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g0819 408 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 12 391 - -
Dod07g0819 408 MobiDBLite consensus disorder prediction 375 408 - -
Dod07g0819 408 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Dod07g0819 408 Gene3D Transferase(Phosphotransferase) domain 1 155 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0819 Dod-Chr7 11697455 11703232 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0819 8 372 Receptor kinase-like Gene Family AT4G23190 57.600 5.71e-154 446
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dod07g0819 Pkinase 2.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0819 - - lang:109335396 556.214