Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0793 ATGATGAAGAGACATAGCGATGAAGCAATAGATAGCATAGATTTGGCTAATTGTCTAGTGCTGCTTTCTCAATATCCTAGAGGAATTAGCAAACCCCAGAAACGTTTTCGCCCTGCAGAATTTGAGTGCTCCACCTGCAACCGGAAATTCCCTTCATTTCAAGCCCTTGGAGGCCACAGGGCTAGCCACAAGAAGCCAAAACAAGAAGGGAATAAAGACCTCAAAGAACAGGCCAAAACTCGGAGCCTTGGGAATAACAACAAGCCCAAAATGCATGAGTGCTCCATTTGTGGTCAAGAATTCTCACTGGGACAAGCACTTGGAGGACACATGAGAAGGCACAGACTTGCCAACAATGAAGTGTTTTCTTCTATAAACCAGGTTGCTGCAAAAGTCCCAGTTCTGAAGAGATCCAACAGTACGAGGGTGATGTGCTTGGACTTGAACCTGACACCTCTGCAGAATGACATGAAGTTATTGTTTGGAAACATGGCACCAAAAGTTGATGACTTCTGA 516 0.4477 MMKRHSDEAIDSIDLANCLVLLSQYPRGISKPQKRFRPAEFECSTCNRKFPSFQALGGHRASHKKPKQEGNKDLKEQAKTRSLGNNNKPKMHECSICGQEFSLGQALGGHMRRHRLANNEVFSSINQVAAKVPVLKRSNSTRVMCLDLNLTPLQNDMKLLFGNMAPKVDDF* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0793 171 ProSitePatterns Zinc finger C2H2 type domain signature. 94 114 IPR013087 -
Dod07g0793 171 Pfam C2H2-type zinc finger 41 66 - -
Dod07g0793 171 Pfam C2H2-type zinc finger 92 115 - -
Dod07g0793 171 SUPERFAMILY beta-beta-alpha zinc fingers 41 114 IPR036236 -
Dod07g0793 171 ProSitePatterns Zinc finger C2H2 type domain signature. 43 63 IPR013087 -
Dod07g0793 171 MobiDBLite consensus disorder prediction 62 79 - -
Dod07g0793 171 SMART c2h2final6 92 114 IPR013087 -
Dod07g0793 171 SMART c2h2final6 41 63 IPR013087 -
Dod07g0793 171 ProSiteProfiles Zinc finger C2H2 type domain profile. 92 114 IPR013087 -
Dod07g0793 171 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY PROTEIN 2 167 - -
Dod07g0793 171 Gene3D Classic Zinc Finger 39 114 - -
Dod07g0793 171 PANTHER ZINC FINGER PROTEIN ZAT5 2 167 - -
Dod07g0793 171 ProSiteProfiles Zinc finger C2H2 type domain profile. 41 68 IPR013087 -
Dod07g0793 171 MobiDBLite consensus disorder prediction 55 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0793 Dod-Chr7 11297816 11298696 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0793 7 169 C2H2 Transcription Factor Family AT2G37430 47.059 2.68e-46 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Dod07g0793 zf-C2H2_6 1.1e-11 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0793 - - aprc:113870747 246.899