Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0785 ATGGGAGAAGAAGAAGCGGTTTGTGTTCAAGCATTAACAGATGGAAAGAGGGAGAGCAACGACGAATCGAGGACTGAACTGAAGCGTGATTATCATCAATGCGTTGTTGCGGATGCAACTGAACCATACCATTCTCCGAACAAGAAACAAGCCAAGGAAGTTTCCAACGACGAATTGCGCTCTGAGGTTTCAAATCCTAACAATTCCGCAACCGAGAATGCGTTAGCCTTTCAAGATATAAGCAGCCAGCCGACTGAATCGGCGAACGCGAATCACACAGAGTGTGGGGAACTAACTTCTACTTGTTTGGAGAATTCAAGCTCTGACGAGACCTTAAGCGATGAAGCCGGTGATCAGAACAATATTAACGATGAGATTCGGAATGATAAGGACACTAATAGTGCTGAGGCAGTGAAGTCATGTGTTGTGCTGGAAATCCCCAAGCATGCTAGTTCAACTGGGATTAGAAAGATTACTTTTAAGTTCAGTAAGAAGAAGGAGGACTATGATTGCCAATCACATGCTCGCGTTGCCTGTGGCAATAATCTATATGGCTTTCGCGGCGATGATGAAGAGTATTTGGCAATGGCAAGTGCTGATTATAATAGTGGTCCACTGGGAAGCCCAAGCGGAATGGACTTGTACACTCGCAATATGGAATTGAAGATGTCCAAGAAGGTAGTCCCCAGCTGCTACCCTACGAATGTCAAGAAGCTGTTATCAACTGGTATCCTTGATGGAGCTGTGGTGAAGTATTTTTACAATCCGGGAAAGGTTGAGCTGCCGGGGATTATTGATGGTGGCGGATATTTGTGTGGCTGTTCAATGTGTAATTACTCAAGAGTGCTTAGTGCTTATGAGTTTGAGCAGCATGCTGGTGCCAAGACTAGACATCCAAATAATCATATATACTTGGAGAATGGAAGACCGATATATAGTATCATACAAGAAATAAAAACTGCTCCGCTCAACATAATAGATGAGGTTATCAAGAATGTGGCTGGCTCATCTGTCAACGAGGAGTCCTTCCTTGTTTGGAAAGAGTGTCTTCTACAAAGCAATGGGAGAGTTCAGAGTTACAAAAGTTATGGCAGCAAGCTTACTGGCATGCCTACTAAAAACATGAGAAAGTTTGAGCCACTTGTCTTCTTCGCATGTGCCAATTATTTTGAGCATCAAATGAATGTGAAGCAGACAACTGATGAGTGGAAACGTGTAGTGAAAAGAAGTGCTGATGGTTGCACAAAGAAAAGGGACAATGATTTACACAGGCTACTTTTTATGCCAAATGGACTACCAGATGGTGCTGAATTGGCTTACTATGTTAAAGGACAGAAATTACTTGGAGGTTACAAACAGGGAAATGGTATAGTCTGTGGTTGTTGTGATATAGAGATAAGCCCATCACAGTTTGAAGCCCATGCTGGAATGGCTGCTAGACGTCAACCATACCGACACATATATACTTCAAATGGATTAACACTTCATGATATAGCTCTCTCTTTGGCAAATGGTCAGAACCTTACCACAGGAGATAGTGACGATATGTGTGCAGTATGTGGAGATGGAGGAGATTTGATTCTTTGCAATGGATGCCCTAGGGCTTTTCATGCAGTCTGCTTGGGTTTACAGTATGTTCCAGAAAGTAGTTGGCTTTGTCTAAATTGTAGAGATAATGCTGGTAATGGAAGAGAATCTTCCATGGTGAGGCCAATTATGATACGGTTGACACGGGTTGATAAAGCACCAGAGTTTGAAATGGGAGGATGTGTTGTTTGCAGGGAACATGATTTCAGTGTTGCTAAGTTTGATGAGCGAACAGTAATAATTTGTGACCAGATGTTTATTGTCACATCTTGCCACAGGAGCTGCCCAAAGATAAGTGGTTTTGTTGTGATGACTGCAATCGAATATACGTGGCTCTACATTAATTCAGTTTCTGCTGGAGCTGACATTATACCAGCTTCCTTGTCAGAACTAATAATCAGGAAGCATGAGCAGAGGGGATTATGTACCTATGGAGGCATGAATGATATCAAGTGGAGAATTTTAAGTGGAAAAAGCCGTTATCCAGAGCATTTACCATTACTTTCTCGGGCAGCTGCAATTTTTAGAGAGTGTTTTGATCCCATTGTTGCGATATCTGGACGTGACCTGATTCCTGTTATGGTCTATGGGAGAAATATATCTGGCCAGGAATTTGGGGGGATGTATTGCATTGTTTTAATTGTGAATTCTGTTGTTGTATCTGCTGGGCTGCTTAGGATTTTTGGCTGTGCTGTTGCTGAGCTTCCACTGGTAGCTACAAGCAGAGAACATCAAGGAAAAGGTTATTTTCAAGTGTTATTCTCCTGCATAGAGAGGTTGCTGTCTTCTCTAAACGTAGAAAAGCTGGTGCTTCCTGCAGCTGGTGATGCGGAGTCAATTTGGACTAAGAAATTAGGCTTCCGAAAGATGAGTGAAGATCAGTTATCCAAATATCTTAGAGAGGTGCAGCTCACCCTCTTCAATAAAACATCAATGCTGGAGAAGACAGTGCAGCTGGCGACAGAATAA 2556 0.4257 MGEEEAVCVQALTDGKRESNDESRTELKRDYHQCVVADATEPYHSPNKKQAKEVSNDELRSEVSNPNNSATENALAFQDISSQPTESANANHTECGELTSTCLENSSSDETLSDEAGDQNNINDEIRNDKDTNSAEAVKSCVVLEIPKHASSTGIRKITFKFSKKKEDYDCQSHARVACGNNLYGFRGDDEEYLAMASADYNSGPLGSPSGMDLYTRNMELKMSKKVVPSCYPTNVKKLLSTGILDGAVVKYFYNPGKVELPGIIDGGGYLCGCSMCNYSRVLSAYEFEQHAGAKTRHPNNHIYLENGRPIYSIIQEIKTAPLNIIDEVIKNVAGSSVNEESFLVWKECLLQSNGRVQSYKSYGSKLTGMPTKNMRKFEPLVFFACANYFEHQMNVKQTTDEWKRVVKRSADGCTKKRDNDLHRLLFMPNGLPDGAELAYYVKGQKLLGGYKQGNGIVCGCCDIEISPSQFEAHAGMAARRQPYRHIYTSNGLTLHDIALSLANGQNLTTGDSDDMCAVCGDGGDLILCNGCPRAFHAVCLGLQYVPESSWLCLNCRDNAGNGRESSMVRPIMIRLTRVDKAPEFEMGGCVVCREHDFSVAKFDERTVIICDQMFIVTSCHRSCPKISGFVVMTAIEYTWLYINSVSAGADIIPASLSELIIRKHEQRGLCTYGGMNDIKWRILSGKSRYPEHLPLLSRAAAIFRECFDPIVAISGRDLIPVMVYGRNISGQEFGGMYCIVLIVNSVVVSAGLLRIFGCAVAELPLVATSREHQGKGYFQVLFSCIERLLSSLNVEKLVLPAAGDAESIWTKKLGFRKMSEDQLSKYLREVQLTLFNKTSMLEKTVQLATE* 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0785 851 PANTHER ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN 4 847 - -
Dod07g0785 851 Gene3D - 677 845 - -
Dod07g0785 851 SMART PHD_3 516 557 IPR001965 -
Dod07g0785 851 MobiDBLite consensus disorder prediction 1 69 - -
Dod07g0785 851 MobiDBLite consensus disorder prediction 45 59 - -
Dod07g0785 851 MobiDBLite consensus disorder prediction 15 35 - -
Dod07g0785 851 MobiDBLite consensus disorder prediction 103 131 - -
Dod07g0785 851 Pfam Tify domain binding domain 263 317 IPR032308 -
Dod07g0785 851 Pfam Tify domain binding domain 450 499 IPR032308 -
Dod07g0785 851 Pfam PHD-finger 516 557 IPR019787 -
Dod07g0785 851 ProSiteProfiles Zinc finger PHD-type profile. 514 559 IPR019787 -
Dod07g0785 851 PANTHER AUTOIMMUNE REGULATOR 4 847 - -
Dod07g0785 851 SUPERFAMILY FYVE/PHD zinc finger 512 559 IPR011011 -
Dod07g0785 851 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 735 821 IPR016181 -
Dod07g0785 851 MobiDBLite consensus disorder prediction 103 119 - -
Dod07g0785 851 CDD PHD1_AIRE 516 556 - -
Dod07g0785 851 ProSitePatterns Zinc finger PHD-type signature. 517 556 IPR019786 -
Dod07g0785 851 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 509 565 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0785 Dod-Chr7 11145090 11157614 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0785 20 851 PHD Transcription Factor Family AT3G53680 51.311 0.0 813
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Dod07g0785 TDBD 8.9e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0785 - - gmx:100808999 1332.78