Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0768 ATGAACGAAGAAGAAGAAGAATATACAATGCCAAGTTCTTCTTCTGCTCCAAAGCAACCCTCCGGGCAAATCGACGAGATCATGGTGGAACTCTTACGGCAAAACGGCCAGGTCGTTTTGCAAAGCCAAAACCAGCAACAGCCAAGAAAACCGCCGTCGCTGTCGCCGTGGCCGTCGCCGGCGAGAAGCACCGCCGCTGCTCTGGCGGATCCGTCGTCGGTGAGGGAAGCAGAAAATTACCATAAGCAACACTTGTTCATGCAAGAAGACGAACTGGCTTCGTGGCTTCACTATTCGATCGACGAAGATCCTCCGTTGGATCACCGCGATTTCTACGCCGACATGATCTACGCGCCGCCACAGAACCACCACGGTACGGCGGAGCTCCTGCCGCCGATTCCGCAGGCAAGGAGGATTCAGAACTTCGCGCACTTCTCGAAGCACAGCAATGCTAGGGCTGAGACGGCGGCGCTGAGGCCGCCGGCGAGATCTAAAGGTGCTGCGAGAGCGGCGCGCGAATCGACGGTGGTGGATTCATGCGAGACGCTAGCTGAGACGGCGACGGCGGCTGTGGTTTCGAGAAGCTCGGAGGAGCACGCTGGAAAAGCGGCGTGGTCGGATGGCGGGGCAGAGACGGCGGCGGCGACGTGCGAGATGACAGTGACGTCATCGCCGGGATGTTCGAGCGGGAGCGCTGAAGCGGTTGTGGAGCGGAAGAGGAAGAGACGCGAAGCGGAGGATTCAGAGTTTCAGAGCGAGGATGTCGATTTTGAATCACGGGTAACAGAAAAACAAGTCCGTGCTGGCTCACCATCTACAAAGAGGTCTCGTGCTGCAGAAGTCCATAATCTTTCAGAAAGGAGGCGTCGAGATAGAATCAACGAAAAGATGAGAGCTTTGCAGGAACTTATACCCCAGTGCAACAAGTCTGACAAAGCCTCAATGCTGGATGAAGCAATTGAATACTTGAAGTCACTGCAGTTACAAGTGCAGATGATGTCCATGGGGTGTGGTATGGTACCCATGATGTTACTTGGAATCCAGCAGTACATGCCGCCAATGGGAATGGGCATGGAAATGGGGATGAACAGCCCAGTAATGCCATTTCCCAATATGTTAGCTAGTTCGACTTCGCCAGCAGCAACTGCAGCTGCTCATTTGGGACCAAGGTTCCCCATGCCCCCATTCCATATGCCCCATGTTCTTGCACCTGATTCATCCAGAATGCAAGCAGCAAATCAGACAGATAATATCCTTACCTTGCTTGGTACACCTGATCCAGATCAATCACGTATCCCAAACTTCGCTGATCCTTATCAGCAATACCTCGGTCCCCACCATATGGATTTACATTTAATGCAGGCAATGAACCAACCAAATGCCACCAAGCAAAGTACCAGTAAGGGCCAAGAGAATCCAGAAAAGCATCAGCCAGGAGAACCATGA 1446 0.5318 MNEEEEEYTMPSSSSAPKQPSGQIDEIMVELLRQNGQVVLQSQNQQQPRKPPSLSPWPSPARSTAAALADPSSVREAENYHKQHLFMQEDELASWLHYSIDEDPPLDHRDFYADMIYAPPQNHHGTAELLPPIPQARRIQNFAHFSKHSNARAETAALRPPARSKGAARAARESTVVDSCETLAETATAAVVSRSSEEHAGKAAWSDGGAETAAATCEMTVTSSPGCSSGSAEAVVERKRKRREAEDSEFQSEDVDFESRVTEKQVRAGSPSTKRSRAAEVHNLSERRRRDRINEKMRALQELIPQCNKSDKASMLDEAIEYLKSLQLQVQMMSMGCGMVPMMLLGIQQYMPPMGMGMEMGMNSPVMPFPNMLASSTSPAATAAAHLGPRFPMPPFHMPHVLAPDSSRMQAANQTDNILTLLGTPDPDQSRIPNFADPYQQYLGPHHMDLHLMQAMNQPNATKQSTSKGQENPEKHQPGEP* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0768 481 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 277 326 IPR011598 GO:0046983
Dod07g0768 481 MobiDBLite consensus disorder prediction 150 177 - -
Dod07g0768 481 MobiDBLite consensus disorder prediction 1 25 - -
Dod07g0768 481 MobiDBLite consensus disorder prediction 190 209 - -
Dod07g0768 481 CDD bHLH_AtPIF_like 277 340 - -
Dod07g0768 481 MobiDBLite consensus disorder prediction 238 263 - -
Dod07g0768 481 MobiDBLite consensus disorder prediction 7 21 - -
Dod07g0768 481 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 13 479 - -
Dod07g0768 481 MobiDBLite consensus disorder prediction 457 481 - -
Dod07g0768 481 SMART finulus 283 332 IPR011598 GO:0046983
Dod07g0768 481 Gene3D - 272 335 IPR036638 GO:0046983
Dod07g0768 481 MobiDBLite consensus disorder prediction 238 285 - -
Dod07g0768 481 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 13 479 IPR031066 -
Dod07g0768 481 Pfam Helix-loop-helix DNA-binding domain 281 327 IPR011598 GO:0046983
Dod07g0768 481 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 275 343 IPR036638 GO:0046983
Dod07g0768 481 MobiDBLite consensus disorder prediction 37 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0768 Dod-Chr7 10888151 10899397 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0768 22 332 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G20180 42.059 5.91e-56 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dod07g0768 HLH 4.7e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0768 - - gmx:100788491 491.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2617 01 65447534 65454076 Dod07g0768 07 10888151 10899397 PCT