Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0717 ATGGCGCCCAATGCAAAGGTGTCAGCAGCCTATCGTGCAATGGCGGCTCTTGGGATTGATGAATTGCAAGTGAAACCAGTATTGAAGAAGCTACTTAAGTTGTATGATAAAAATTGGGAACTTATCGAGGAAGAAAACTATAGAGCTTTGGCAGATGCCATATTTGAGGATGCTGAAAAAAATGTACCAGAACTGAAAAAGGTTCCAGAAAAGAAAAAGAAAAGCAAGAAAGTTCATGAAGAAGAGACGGAGAATGAAGAAGCTCAGATGCATGTTGAGCAGGCCCGACCTTTGAAGAGGTTGCGTTTGAAAGGCCAAGAGAGTCAACCTTCGAATCCTTCGACTAGTTCTGCACCCTGCTCTGCTGCCTCTCCTTTAAAAGAGCCTAAATTAGAAGATGACACATTACCTGCGAGTTGTCACAGACCGCGGCCTCAAAACACAGCTCTGTCATCTGGTGGAAATGCAAGGATTGAAGCATGCCCAGTTCCAGCACGAGATGTTATTGTTGACAAGGGAAAGCAACCTGTATCACCCCAAGTTTCTCCTAGAGAAAGAAGATTTATATCTGAATCTCAAAGAGCATCCCCATCATCTAAAGAACCAACAGTTAAATCAGGAATGCTTTTGTTGCCAAGCAACAAAATGCCTCATAATCATGCACTGATCATACCCAAGGATGAGCCTATTGATGGATTGCCTGATTCTCTGGTTCCCATTGCAGTGATTCCTTCTGAGCCGTCAAGTTTAAGGGACTCATCGAAGAAGAATAACGCAGCTGTAAAGCAAAATGGCCATGTTTTTATGGCATCATCAAAATGCAGAGATGGAGTTATTGATGAAGATATTTTTCGTTCCTCAAATGAAGGAGCTACTTCTAATGTAGAGATAGCCTCATCAACTGAGGGAGAGGTAAAAATTTCTCTGAGCTGCAGCTCAGCTGTTGAGGGACTGGATTTTTGTATGCCTACTCGAGAACAAATTCTAAAAATGATGGAGGATAAATGTCTGCAGTCATATAAAATCACTGATCCAAATTTTTCTATTCCGAAACTCTTGAAAGATATATGTGACTGCGTCTTGGAATTCAGTAAAGATTCAAATAAAGACTCCAGGGAAGACCCTATTGAGTCATCAAGGGTTGATGTCTTGAAGGAATCTGAAGCACATGGCACACTGAGTGAGCAAGGAAATAAGGATTTGGACATGATTTCTCTCCCTTCAAATGGATCAATCCATGTTGATTCTTTGGCTGCCTCGCTTTCACCCCGAAGTCCCTTTTCTCTTGCCCACCGGAATGGTAAGGTTGATGCTGTGCTGATTTCTGTGGATGCAATAAATGATTTATCAGAAAATGTTGATGAAAAGGAGTTGGAGGATCCTATGTTCCCAAATTCACACAGTTTAGTGGTTGTTCCACAGCATCAACTTACAGCTGATGATATCAGGTCTTTTCATGATGTAAATGACCTTACAAAAGGAGAAGAAAGTGTTCAAATCCCATGGGTGAATACAATTACTAATGATTTTCCACCACCTTTTCACTACATACCCCAAAACCTTGTGTTCCAAGATGCTTGTGTTAACATTTCTCTATCTGGTATCGTGGATAAGGACTGTTGCTCATCCTGTATGGGCAATTGTATCTTGTTGTCTACACCCTGTGCTTGTGCAAATAAAACTGGAGGAGAATTTGCATACAATGCTCGAGGCCTACTGAAGGAAAAGTTCTTGGAAAAGTGCATTGCTATCAGCCGTAACCCTCAACAACACTACTTCTATTGCAAAGACTGCCCACGTGAAACATCTAAGAATGATGGTTGTTTAGAACCATGTAGAGGACACTTGAAGAGGAAGTTTATTAAAGAATGCTGGAGCAAATGTGGCTGTGGAAAACAATGTGGCAATCGGATTGTCCAGCGTGGAATTACTTGCAACCTGCAGGTATTCTTCACTTTGGAAGGAAAAGGATGGGGTCTTCGTACCTTGGAGGACCTGCCAAAAGGTGCATTTGTGTGTGAGTTTGGTGGAGAGATCTTAACCATTAAAGAGTTACATGAGAGGAACATGAAAAGTGCTGAAAATGGGAAACATACTTACCCAGTTCTACTGGATGCGGATTGGGATTCAGGATTTGTGAAGGATGAAAAAGCTCTGTGCTTGGATGCAGCATCCTTTGGTAACATTGCTAGGTTTATCAATCACAGATGTTTTGATGCAAACTTGATTGAGATCCCAGTTGAAATTGAGAGCCCTGATCATCACTACTATCATTTTGCCTTTTTCACCTGCAGAAAAGTAGCAGCACAGGAGGAGCTCACTTGGGATTATGGCATTCACTTTAATGACCATGATCATCCTGTCAAGCTGTTCCAGTGCAAATGTGGCAGTAAATTCTGCAGGAATATGAAGCGGTCAAGTAGTAAGTTTAATCTACTACATGTGGGAAATATGGAAAAATTTGTTTTCATGTCTGCCCCTTCAGCTTTTCTCTGGATATAG 2502 0.4149 MAPNAKVSAAYRAMAALGIDELQVKPVLKKLLKLYDKNWELIEEENYRALADAIFEDAEKNVPELKKVPEKKKKSKKVHEEETENEEAQMHVEQARPLKRLRLKGQESQPSNPSTSSAPCSAASPLKEPKLEDDTLPASCHRPRPQNTALSSGGNARIEACPVPARDVIVDKGKQPVSPQVSPRERRFISESQRASPSSKEPTVKSGMLLLPSNKMPHNHALIIPKDEPIDGLPDSLVPIAVIPSEPSSLRDSSKKNNAAVKQNGHVFMASSKCRDGVIDEDIFRSSNEGATSNVEIASSTEGEVKISLSCSSAVEGLDFCMPTREQILKMMEDKCLQSYKITDPNFSIPKLLKDICDCVLEFSKDSNKDSREDPIESSRVDVLKESEAHGTLSEQGNKDLDMISLPSNGSIHVDSLAASLSPRSPFSLAHRNGKVDAVLISVDAINDLSENVDEKELEDPMFPNSHSLVVVPQHQLTADDIRSFHDVNDLTKGEESVQIPWVNTITNDFPPPFHYIPQNLVFQDACVNISLSGIVDKDCCSSCMGNCILLSTPCACANKTGGEFAYNARGLLKEKFLEKCIAISRNPQQHYFYCKDCPRETSKNDGCLEPCRGHLKRKFIKECWSKCGCGKQCGNRIVQRGITCNLQVFFTLEGKGWGLRTLEDLPKGAFVCEFGGEILTIKELHERNMKSAENGKHTYPVLLDADWDSGFVKDEKALCLDAASFGNIARFINHRCFDANLIEIPVEIESPDHHYYHFAFFTCRKVAAQEELTWDYGIHFNDHDHPVKLFQCKCGSKFCRNMKRSSSKFNLLHVGNMEKFVFMSAPSAFLWI* 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0717 833 SUPERFAMILY SET domain 498 801 IPR046341 -
Dod07g0717 833 MobiDBLite consensus disorder prediction 63 103 - -
Dod07g0717 833 Pfam SET domain 657 778 IPR001214 GO:0005515
Dod07g0717 833 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR2-LIKE PROTEIN 380 807 - -
Dod07g0717 833 MobiDBLite consensus disorder prediction 367 396 - -
Dod07g0717 833 Pfam Pre-SET motif 492 637 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Dod07g0717 833 SMART preset_2 488 629 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Dod07g0717 833 MobiDBLite consensus disorder prediction 105 122 - -
Dod07g0717 833 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 380 807 - -
Dod07g0717 833 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 1 305 - -
Dod07g0717 833 MobiDBLite consensus disorder prediction 63 156 - -
Dod07g0717 833 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 829 IPR025776 -
Dod07g0717 833 SMART set_7 645 784 IPR001214 GO:0005515
Dod07g0717 833 Gene3D SET domain 474 786 IPR046341 -
Dod07g0717 833 CDD SET_SETDB-like 512 778 - -
Dod07g0717 833 Gene3D - 1 60 IPR043017 -
Dod07g0717 833 MobiDBLite consensus disorder prediction 170 204 - -
Dod07g0717 833 ProSiteProfiles Pre-SET domain profile. 544 642 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Dod07g0717 833 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR2-LIKE PROTEIN 1 305 - -
Dod07g0717 833 MobiDBLite consensus disorder prediction 367 395 - -
Dod07g0717 833 Pfam Ubiquitin-binding WIYLD domain 5 59 IPR018848 GO:0018024
Dod07g0717 833 ProSiteProfiles SET domain profile. 645 778 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0717 Dod-Chr7 10043175 10050859 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0717 621 803 C2H2 Transcription Factor Family AT2G23740 37.037 3.61e-28 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Dod07g0717 Pre-SET 1.9e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0717 - - gmx:100787369 1064.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g0717 07 10043175 10050859 Dod07g0717 07 10043175 10050859 ECH