Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0713 ATGGAAGCACGTCCTGCTTTATCCATTGAAAGATTGAGTGCAAAACAACTCAATACCTTGGGGATGTCTGGAGCACTTTCTTCGTCCTTGCCAGTCCTTCCAACACCCCTAGAAGAGACGTATACCAAGTTGGCTGATTCACCGCTGGCTTTTGTAGAACAGGGGCTCGTGACTAAACCTTTTACTCATTCCAGCAATTCAAATTCCAGTGGAGTAGTTGGGCATATTTTTTCATCGTCTCCTGGATATTCAACTGCTCTTCATCATTCGTCCCTTTCACCTCATGAGAAACACTCTAGAAATGCTCACTTTATTTCCCAATCATCGAGTAGCATGGCTCCATTGCCATCATATTCTTCAAATAGTGGACCACCACCTTCTACGACATCAAGCCATTATTCCAATGAAAACAGTGCTTCCTGGCATACAGATTCCGTTTCAAGCTTTCTGGATTTTCCTGCAAATACCTCCATTGATAATGGTAGGGTAGAAAGCAGTGCCTGCACTATCATGGCATCTGAGGAGTATTGTAAGCGAAATGATTGGCAGGAGTGGGCTGACCAGCTAATCAGTGATGATGATAATTTGACTTCTAATTTGAATGACCTTCTTGCTGATAACATTCTGGATCTTGAGCCAAAGGAGCCATTCCAGGTTTCAAAACCATCTTCACAATTTCCAGGACATCCATCCCAAGGCCATCAACAACTTCCTGCTTTGTCTGGAGAAAATGGCACTGGTGCTGCCCCCTCTTCATCAGCAAATTCTGCTCCTACCAAGCCACGAATGCGTTGGACACCAGAACTTCATGAGGCCTTTGTGGAGGCTGTCAACCAACTTGGTGGGAGTGAAAGAGCAACTCCTAAGGGTGTGCTGAAGCTCATGAAAGTTGAAGGATTAACTATATATCATGTTAAAAGCCACTTGCAAAAATACAGGACAGCCAGATACAGACCGGAGTCCTCTGAAGGAGTTGCAGAGAAAAAGACAAGTTCCATTGGAGAGATGTCATCTCTAGATATGAACACTGGTATTGATATCACTGAAGCTTTACGGATGCAGATGGAGGTTCAGAAGCGCTTGCATGAACAGCTTGAGATTCAAAGAAATCTACAGCTGCGAATAGAAGAACAAGGAAGGTACCTCCAGATGATGTTTGAAAAGCAATGTAAATCTGGCACCGAAACGTTTAAGGCATCGTCATCCACAATCAAGAATCCATCTGAAGTTCCTTCAGAAGCTATGAAAGATGTTCCTTCCAAAACTGAAATGGAAACATCACGAGTGGAACATTGCAATCCAGGACCTGATCAACCTGATGGCAATACGCCAGCTGAGGAAGGCTCGGTCGAAACGGGTGGGAAGCATGACTCTCCCAAAATTCAACCTTCTGAGAATCCTAAGCAGCATGCTATTGCTTGTGATGATAGTTATCAACCCTCAAAGCGGCAGCGAACAGACGAGTAA 1467 0.4431 MEARPALSIERLSAKQLNTLGMSGALSSSLPVLPTPLEETYTKLADSPLAFVEQGLVTKPFTHSSNSNSSGVVGHIFSSSPGYSTALHHSSLSPHEKHSRNAHFISQSSSSMAPLPSYSSNSGPPPSTTSSHYSNENSASWHTDSVSSFLDFPANTSIDNGRVESSACTIMASEEYCKRNDWQEWADQLISDDDNLTSNLNDLLADNILDLEPKEPFQVSKPSSQFPGHPSQGHQQLPALSGENGTGAAPSSSANSAPTKPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTARYRPESSEGVAEKKTSSIGEMSSLDMNTGIDITEALRMQMEVQKRLHEQLEIQRNLQLRIEEQGRYLQMMFEKQCKSGTETFKASSSTIKNPSEVPSEAMKDVPSKTEMETSRVEHCNPGPDQPDGNTPAEEGSVETGGKHDSPKIQPSENPKQHAIACDDSYQPSKRQRTDE* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0713 488 MobiDBLite consensus disorder prediction 103 138 - -
Dod07g0713 488 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 257 317 IPR017930 -
Dod07g0713 488 SUPERFAMILY Homeodomain-like 258 314 IPR009057 -
Dod07g0713 488 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL4-RELATED 25 487 - -
Dod07g0713 488 MobiDBLite consensus disorder prediction 217 262 - -
Dod07g0713 488 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 25 487 IPR044848 GO:0003700
Dod07g0713 488 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 260 314 IPR006447 GO:0003677
Dod07g0713 488 MobiDBLite consensus disorder prediction 394 409 - -
Dod07g0713 488 Pfam MYB-CC type transfactor, LHEQLE motif 346 392 IPR025756 -
Dod07g0713 488 MobiDBLite consensus disorder prediction 87 138 - -
Dod07g0713 488 MobiDBLite consensus disorder prediction 218 260 - -
Dod07g0713 488 Gene3D - 259 318 - -
Dod07g0713 488 Pfam Myb-like DNA-binding domain 262 313 IPR001005 -
Dod07g0713 488 MobiDBLite consensus disorder prediction 394 488 - -
Dod07g0713 488 MobiDBLite consensus disorder prediction 416 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0713 Dod-Chr7 10004459 10010732 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0713 1 439 G2-like Transcription Factor Family AT4G28610 44.667 5.84e-98 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Dod07g0713 Myb_DNA-binding 9.2e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0713 - - aip:107624999 709.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g0713 07 10004459 10010732 Dod07g0713 07 10004459 10010732 ECH