Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0702 ATGGTTCCTTCATCTGAATCCCTTGTGACCAATGATTGTTCAGCAAGTGGACAGTCCTGCTTGGCTGGACAAGTTGACAACAAGAAGCCGGACACTGGCAATATAGAAGAAGCTGAATCATCATTACGTGAGAGTGGCGTCTTGAACTATGAAGAAGCCAGAGCTCTTCTAGGAAGATATGAATACCAGAAAGGAAATTTAGTAGCTGCTTTACATGTCTTTGAAGGAATAGATATAGGTGCTGTGACTCCCAAGATCAAAATTGCCCTTTCCAGAAGCAGAGAACGCCGTAAGAGACACTCCCAGAATTATGATGAACCACAAATGTCTATACATGCTGTTGCCTTATTGTTAGAAGCCGTCTTCCTAAAAGCAAAATCTTTGCAGGTTCTTGGAAGGTTTAAAGAAGCTGCCCAATCCTGCAAAGTTATTCTGGACATAGTGGAGTCTTCATTGCCTGAAGGCTTGCCTGATAACTTTGGTGCTGAATGTAAATTGCAGGAGACTCTAAGCAAGGCAGTTGAGCTGCTTCCAGAATTGTGGAAACTTGCTGATTTTCCGCGTGAAGCTATTTTATCTTACCGGCGAGCACTCCTTCATCAATGGAATCTTGATGCAGAAACTATAGCAAAGATTCAGAAAGAATTTGTTGTTTTTCTTCTATATAGTGGAGGGGAAGCAACACCCCCTGACCTCCGATCCCAAATGGATGGATCATTTGTACCCATAAACAACGTTGAGGAGGCTATACTTCTTCTGATGATTTTGCTAAGAAAAGTCTCTCTAAATAGAATTGAGTGGGATCCTTCAATTTTAGACCACCTTTCATTTGCTCTGTCAGTTTCTGGAGATTTAACAGTTTTAGCCAATCAATTGGAAGAATTGCTTCCTGCGACTATACATAAAAAGGAGAGGTACCATGCTTTGGCTCTTTGTTATTATGGAGCAGGTAAGAACTTGGTAGCTCTGGATCTTCTTAAAAAATTGTTGAGCAGTAAAGAGGACCCTAAACATATTCAGGGTTTGTTATTGGCTTCTAAGATTTGCTATGAGAACTCTAGTCTTGTAGAACAAGGGATAGGCTTTGCTCGCAGAGTGCTTGAGAACTTGGATGGCCGATGTAATCAGTTAGAAAATCTGGCCAATTGCTTACTTGGTGTTTCGCTTTCAGCAAACTCAAAATTGGCGATTTCTAATTCTGAGATGGTTAAGAGACAATCTGAGGCACTTCATGCCCTGGAAACTGCTGCCAAAATGACCAGAATGAAAGACCCCCTTGTACTTTACCATCTCAGTTTAGAATATGCAGAGCAAAGGAAGTTGGATGCTGCACTTTATCATGCTAAGTGCTTCCTAAAACTGGAAGGTGGTTCTAATGTTAAAGGGTGGTTATTGTTAGCCCGGATATTATCTGCTCAAAAACGGTTTTGGGATGCTGAATCTATTATCAATGCTGCTTTGGAACAGTCTGGAAAATGGGATCAAGGTGATTTGTTGCGGACAAAAGCGAAACTTCAAATTGCCCAGGGCCAGTTAAAGAGTGCCATTGAGACATACACTCAACTTCTTGCTGTTCTTCAAGTTCAGAGTAAAAGTTTTGGTTCTGGGAAGAAGCTATTTAAGGTTTGTTGTTGTAATAACTCATGCAGATAG 1653 0.4108 MVPSSESLVTNDCSASGQSCLAGQVDNKKPDTGNIEEAESSLRESGVLNYEEARALLGRYEYQKGNLVAALHVFEGIDIGAVTPKIKIALSRSRERRKRHSQNYDEPQMSIHAVALLLEAVFLKAKSLQVLGRFKEAAQSCKVILDIVESSLPEGLPDNFGAECKLQETLSKAVELLPELWKLADFPREAILSYRRALLHQWNLDAETIAKIQKEFVVFLLYSGGEATPPDLRSQMDGSFVPINNVEEAILLLMILLRKVSLNRIEWDPSILDHLSFALSVSGDLTVLANQLEELLPATIHKKERYHALALCYYGAGKNLVALDLLKKLLSSKEDPKHIQGLLLASKICYENSSLVEQGIGFARRVLENLDGRCNQLENLANCLLGVSLSANSKLAISNSEMVKRQSEALHALETAAKMTRMKDPLVLYHLSLEYAEQRKLDAALYHAKCFLKLEGGSNVKGWLLLARILSAQKRFWDAESIINAALEQSGKWDQGDLLRTKAKLQIAQGQLKSAIETYTQLLAVLQVQSKSFGSGKKLFKVCCCNNSCR* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0702 550 PANTHER PROTEIN NPGR2 1 542 - -
Dod07g0702 550 PANTHER PROTEIN NPG1 1 542 IPR043376 -
Dod07g0702 550 Gene3D Tetratricopeptide repeat domain 27 386 IPR011990 GO:0005515
Dod07g0702 550 SUPERFAMILY TPR-like 404 525 IPR011990 GO:0005515
Dod07g0702 550 SUPERFAMILY TPR-like 274 352 IPR011990 GO:0005515
Dod07g0702 550 SMART tpr_5 460 493 IPR019734 GO:0005515
Dod07g0702 550 SMART tpr_5 118 151 IPR019734 GO:0005515
Dod07g0702 550 SMART tpr_5 496 529 IPR019734 GO:0005515
Dod07g0702 550 SMART tpr_5 425 458 IPR019734 GO:0005515
Dod07g0702 550 MobiDBLite consensus disorder prediction 20 40 - -
Dod07g0702 550 Gene3D Tetratricopeptide repeat domain 387 535 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0702 Dod-Chr7 9790236 9796435 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0702 5 542 Calmodulin-binding Proteins AT4G28600 61.326 0.0 618
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0702 K21843 - gmx:100800762 875.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g0702 07 9790236 9796435 Dod01g2559 01 64778871 64793013 PCT