Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0696 ATGGATCATGTGGTTGGTGGGAAGTTCAAACTTGGAAGGAAAATTGGGAGTGGGTCTTTTGGAGAGCTCTTTATAGCTGTTAATATACAAACTGGAGAGGAGGTGGCTATAAAGCTGGAACCTGCGAAGACCAGGCATCCACAGCTTCACTATGAGTCAAAATTGTATATGCTTCTTCAAGGGGGAACGGGGATTCCCCACCTCAAGTGGTTTGGAGTTGAGGGAGAGTACAATGTCATGGCTATTGACCTTCTTGGACCAAGTCTGGAAGATTTGTTCAATTATTGCAACCGGAAGTTCTCATTGAAGACAGTGTTGATGCTTGCTGATCAATTAATTAACAGAGTTGAATATATGCATTCAAGAGGTTTCCTACACCGTGACATAAAGCCAGACAATTTTTTAATGGGTCTAGGCCGCAAATCAAATCAGGTGTACATAATTGACTATGGCCTTGCAAAAAAGTATAGGGATCTTCAAACTCATAGGCACATCCCATACAGAGAAAACAAGAACCTTACCGGCACAGCACGCTATGCAAGTGTCAACACTCATCTCGGAATTGAACAAAGCAGAAGGGATGATCTAGAATCTCTTGGTTATGTGCTCATGTACTTCTTAAGAGGAAGTCTTCCCTGGCAGGGACTAAGGGCTGGCAACAAGAAACAAAAATATGATAAAATCAGTGAGAAGAAGGTGTCAACTACTATAGAGGTTCTCTGCAAATCATATCCTGCTGAGTTCGTATCATACTTCCACTACTGCCGATCTTTGCGGTTTGAGGACAAGCCAGATTATTCATATCTAAAGAGGCTTTTCCGAGACCTATTTATTCGAGAAGGCTATCAATTTGACTATATTTTTGACTGGACAATATTGAAGTATCCACAGATTGGTGGCACCTCTAGAGGGCGGAATGGCGCTGGGAAGGCAGCTATGGATTATGGTCCACCTGTACAAAAACCAGAAAAGATCTCAGTTGGGAAAGAGCTCCGAGAGAAATTCTCTGGTGCAGTTGAAGCATTCTCCCGGAGGAACCCCATAACTGCCAGTCCTCGCGTGGATCACATGAGATATAGGGCTTCTGACGATGTAGCAGTACACAAGGATATGCACTATGCCCAATACAATTCCACTAGATTTGCCAGCAATTCAAGAAAGGCCATGGTCTCATCAGGTGACTATGCTGGTCCTCATGTTGGGATGACCCCAGGCAGGGGTTATCATGCTGGGATGACCCCGAATAGGGGCCATCACGTTGGAATGACCCCTAGTAGGGGGTATCATGCCGGGATGACCCCAAATAGAGGCCATCATGGTGGGATAACCCCAAGTAAGGGCCATCCAACTACCACACATCGAATTCAACCTATGCATGAGACCAAACAAGCAACATTTGCTCGTAACGGGTCTACAAGACGCCACCGTGATGATCCTCTAAGAAGCTTTGAGCTCCTTAATATCAGGAAGTAA 1473 0.4481 MDHVVGGKFKLGRKIGSGSFGELFIAVNIQTGEEVAIKLEPAKTRHPQLHYESKLYMLLQGGTGIPHLKWFGVEGEYNVMAIDLLGPSLEDLFNYCNRKFSLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKSNQVYIIDYGLAKKYRDLQTHRHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLRAGNKKQKYDKISEKKVSTTIEVLCKSYPAEFVSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYIFDWTILKYPQIGGTSRGRNGAGKAAMDYGPPVQKPEKISVGKELREKFSGAVEAFSRRNPITASPRVDHMRYRASDDVAVHKDMHYAQYNSTRFASNSRKAMVSSGDYAGPHVGMTPGRGYHAGMTPNRGHHVGMTPSRGYHAGMTPNRGHHGGITPSKGHPTTTHRIQPMHETKQATFARNGSTRRHRDDPLRSFELLNIRK* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0696 490 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g0696 490 MobiDBLite consensus disorder prediction 445 468 - -
Dod07g0696 490 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
Dod07g0696 490 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Dod07g0696 490 PANTHER CASEIN KINASE-RELATED 1 394 - -
Dod07g0696 490 PANTHER CASEIN KINASE I-LIKE PROTEIN 1 394 - -
Dod07g0696 490 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g0696 490 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g0696 490 Gene3D Transferase(Phosphotransferase) domain 1 1 317 - -
Dod07g0696 490 MobiDBLite consensus disorder prediction 439 481 - -
Dod07g0696 490 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Dod07g0696 490 CDD STKc_CK1_delta_epsilon 8 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0696 Dod-Chr7 9696362 9702661 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0696 8 213 MAP Kinase Kinase Kinase AT3G06030 25.000 1.36e-12 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Dod07g0696 Pkinase 9.3e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0696 K08960 - gmx:100789031 762.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g0696 07 9696362 9702661 Dod07g0696 07 9696362 9702661 ECH
Dod01g2546 01 64669740 64676620 Dod07g0696 07 9696362 9702661 PCT