Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0684 ATGCATATAGGTCAAACGGATACAACTTCAGTGGAATGTCTAATCAACAGCATTTCTCGATTCATTCATCTTGTTTCATGCCAAACTGTGAAACCTGCGCCCGTTCAGAAGATCTGTAATAATATGGTTGGGGTTTTAAAGCGTTTGAAACCAGTACTCGATGATGTCATGGGTTACAAAATCCCTTTTCATGAAAATCTGTGTAAAGAGTGTGAAGAATTAGATATCCGAGTTAATGAAGCTAGAGATTTCATTGAAAAATGGGGTCCCAAGATGAGTAAGATTCACAGTGTTCTGCAAAGTGGGACATTGTTGATCAAGTTACAGAGCACTTCACTCGACATTTGTCACATGATAGTTAGATCTCTACAGTCACCTCCATCTGCTTCAGTTTTGGCTAATCTTCAGCACTATATCCAGGAACTTCAGTGTCTCAAGAAGGAAACAGCAATGGTCGATATAGAAGAAACGCTGAGAAACCAAAGGGAAAATATTGAGCCTTGCGATGAACATCTGAAGGATATTATTGAGTTACTAAAATTGACATCAAATGAGGAGCTCTTCAAAGAAAGTATTGCTGTAGAAAAGGAAAAGTTGAACGCTGAAGTAAGTAAAATGATAGGGGACTTGGATGAAATTAACGAAATTGTGATTCTTGTCCGCAATTTGCGTGATCTTGCGATGAAAACTCAGTTCTTTGAAGTCAAAAGTGGTGTCCCAATCCCTCCATACTTCCGTTGTCCCTTATCATTGGAATTCATGTTGGATCCTGTTATTGTGGCTTCAGGTCAAACATATGACAGGCAATCCATCCAAAAGTGGCTCGATCATGGGCTGACTATTTGTCCCAAGACTCGTCAGAGACTAACTCATACAAATCTCATTCCCAATTATACTATTAAAGCTATGATAGCGACTTGGTGTGAGGAGAATAATGTCAAACTTTCCAGTGACTCTCAGAACAACAATTCTGATCAAATTACATCGCCCTTGGATCCTTCATTGCCTCAGGATTTAACTCATGAATGTGGTTCTGGATCTGCATCTATTATCAATTCCACTTCAAGATCCTCTCTTCAAACTGGAAATGGGAATGTGAAGCAAAAGAGTAATAACTCTCTCAGCTTAAGTGGAGAGTATAATGAATGCCAGAGTGGAACAATGGAAAAGTATGAGCAACAATCCTCTGATGTTCACAGTAGAAGTGAATCATTCTCAAGTTCAATTTCCAGTACTGATTGGGTACTTCCAGCTTCAAAACAGGTGTCAGGGATATCCAATAAGAATCAAAATGTGAAGGCAATTTCTGGAGAAATAAAAAATGTGCACCCTGCTTCTCATGGTAATAAACAATCAGGGATTTCTCAGTTTTCTGGAAATCAATTTCAAAGCCCTGGATCAAAAATGGGAGGGGTGGAGAATGGAAACAACAATAATAATATAAACAGCAATGCTAATCAAAGTCATTCAAGAGTTGATTTGCGTGCTGTTATCAACCTGGGGTCAGATGAAATGACCAACTCATCTCAAGTTAATAAGTTGATTAATGACCTTCACAGCCAATCAACTGAAGTGCAAACTGCTGCTGCAGAACAGTTGAGGCTCCTTACAAAGCATAACATGGAAAACCGTATCATTATAGGGCAGTGCGGAGCTGTTGAGCCATTACTTTCGCTGCTATATTCTGATGTGAAGATAACACAAGAGCATGCCGTGACAGCTCTGCTGAATTTGTCAATTAATGAAGATAACAAGACCTTGATTATGGAAGCAGGAGCCATGGAACCACTAATCCATGCTCTGAAGACAGGAAATGATGGTGCCAAGGAGAATTCTGCGGCAGCACTATTCAGCCTCTCTGTAATAGAGAACAACAAGGCGAAAATTGGCCGATCTGGTGCAGTTAAAGCTTTGGTCGATCTTCTTGCCTCAGGAACACTTAGAGGAAAGAAAGATGCTGCTACTGCTTTATTTAACCTTTCAATATTTCACGAGAATAAAGCTCGCATAGTTCTGGCTGGAGCTGTGAAATTTCTGGTTCAGTTGATGGACCCTTCCGATGGAATGGTTGACAAGGCTGTTGCTCTTCTGTCAAACCTGTCAACGATTGCAGAGGGCCGATTAGAAATCGCGAGGGAAGGGGGCATCCCCTTACTTGTTGAAATTGTGGAAACAGGTTCCCAGAGGGGAAAGGAAAATGCTGCTTCTGTCCTCTTACAGTTATGCCTTCATAGCTCCAAGTTTTGTACTCTAGTTTTGCAAGAAGGTGCTGTACCTCCCCTAGTTGCATTATCTCAATCTGGTACGCCAAGAGCAAAAGAAAAGGCACAACAGCTTCTCAGCCATTTCCGCAATCAGCGGGAAGGAGCTACCGGGAAGGGAAAATCATGA 2391 0.4103 MHIGQTDTTSVECLINSISRFIHLVSCQTVKPAPVQKICNNMVGVLKRLKPVLDDVMGYKIPFHENLCKECEELDIRVNEARDFIEKWGPKMSKIHSVLQSGTLLIKLQSTSLDICHMIVRSLQSPPSASVLANLQHYIQELQCLKKETAMVDIEETLRNQRENIEPCDEHLKDIIELLKLTSNEELFKESIAVEKEKLNAEVSKMIGDLDEINEIVILVRNLRDLAMKTQFFEVKSGVPIPPYFRCPLSLEFMLDPVIVASGQTYDRQSIQKWLDHGLTICPKTRQRLTHTNLIPNYTIKAMIATWCEENNVKLSSDSQNNNSDQITSPLDPSLPQDLTHECGSGSASIINSTSRSSLQTGNGNVKQKSNNSLSLSGEYNECQSGTMEKYEQQSSDVHSRSESFSSSISSTDWVLPASKQVSGISNKNQNVKAISGEIKNVHPASHGNKQSGISQFSGNQFQSPGSKMGGVENGNNNNNINSNANQSHSRVDLRAVINLGSDEMTNSSQVNKLINDLHSQSTEVQTAAAEQLRLLTKHNMENRIIIGQCGAVEPLLSLLYSDVKITQEHAVTALLNLSINEDNKTLIMEAGAMEPLIHALKTGNDGAKENSAAALFSLSVIENNKAKIGRSGAVKALVDLLASGTLRGKKDAATALFNLSIFHENKARIVLAGAVKFLVQLMDPSDGMVDKAVALLSNLSTIAEGRLEIAREGGIPLLVEIVETGSQRGKENAASVLLQLCLHSSKFCTLVLQEGAVPPLVALSQSGTPRAKEKAQQLLSHFRNQREGATGKGKS* 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0684 796 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 633 675 IPR000225 GO:0005515
Dod07g0684 796 SUPERFAMILY RING/U-box 239 314 - -
Dod07g0684 796 Pfam Armadillo/beta-catenin-like repeat 581 620 IPR000225 GO:0005515
Dod07g0684 796 Pfam Armadillo/beta-catenin-like repeat 542 579 IPR000225 GO:0005515
Dod07g0684 796 Pfam Armadillo/beta-catenin-like repeat 625 661 IPR000225 GO:0005515
Dod07g0684 796 Gene3D - 585 793 IPR011989 -
Dod07g0684 796 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 674 715 IPR000225 GO:0005515
Dod07g0684 796 MobiDBLite consensus disorder prediction 442 488 - -
Dod07g0684 796 MobiDBLite consensus disorder prediction 445 488 - -
Dod07g0684 796 Coils Coil 196 216 - -
Dod07g0684 796 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 551 593 IPR000225 GO:0005515
Dod07g0684 796 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 3 11 791 - -
Dod07g0684 796 Gene3D - 473 584 IPR011989 -
Dod07g0684 796 SMART arm_5 703 743 IPR000225 GO:0005515
Dod07g0684 796 SMART arm_5 663 702 IPR000225 GO:0005515
Dod07g0684 796 SMART arm_5 540 580 IPR000225 GO:0005515
Dod07g0684 796 SMART arm_5 622 662 IPR000225 GO:0005515
Dod07g0684 796 SMART arm_5 581 621 IPR000225 GO:0005515
Dod07g0684 796 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 226 325 IPR013083 -
Dod07g0684 796 ProSiteProfiles U-box domain profile. 240 314 IPR003613 GO:0004842|GO:0016567
Dod07g0684 796 PANTHER U BOX DOMAIN-CONTAINING 11 791 - -
Dod07g0684 796 SMART Ubox_2 244 307 IPR003613 GO:0004842|GO:0016567
Dod07g0684 796 Pfam U-box domain 241 312 IPR003613 GO:0004842|GO:0016567
Dod07g0684 796 SUPERFAMILY ARM repeat 504 783 IPR016024 -
Dod07g0684 796 MobiDBLite consensus disorder prediction 316 411 - -
Dod07g0684 796 CDD RING-Ubox_PUB 245 287 IPR045210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0684 Dod-Chr7 9447376 9452487 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0684 7 796 U-box Gene Family AT3G54790 52.256 0.0 709
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0684 - - gmx:100800949 1182.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g0684 07 9447376 9452487 Dod07g0684 07 9447376 9452487 ECH