Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0671 ATGGAGGGAGAGAGATCATCAATTTCGAATGCAAATTGTGAGGTAAGGTATAGAGGGATTCGTAGGAGGCCATGGGGAAAATTTGCAGCTGAAATTCGTGACCCTACAAGGAAAGGGACACGCATATGGCTTGGAACATTTGACACCGCAGAGCAAGCTGCAAGGGCTTATGATGCTGCTGCTTTCCATTTCAGAGGTCATAGGGCCATTCTCAACTTCCCTAATGAGCACCAAACTCCTGTTAACCCAAACTCTTCATTGCCTTTGCCTCTTCCTATTCCTCCTCCTCCTCCTCATTCTTCGTCTTCTTCCTCCTCCTCCTCTTTGTATTCCGGTGAGGGACTTGTGATGAAAGCTGGTACTTCTGGAGACATAATGCAAGGTGGTGATCTTGGTACTTTTGAGTTGGAGTATTTTGACAGCAAGTTGTTGGAAGAACTCCTTCATGATCAGGGTCAGGACGATCGGCAAATTTATAGCCATGATCGAAGTTTTTATCAATGA 504 0.4544 MEGERSSISNANCEVRYRGIRRRPWGKFAAEIRDPTRKGTRIWLGTFDTAEQAARAYDAAAFHFRGHRAILNFPNEHQTPVNPNSSLPLPLPIPPPPPHSSSSSSSSSLYSGEGLVMKAGTSGDIMQGGDLGTFELEYFDSKLLEELLHDQGQDDRQIYSHDRSFYQ* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0671 167 Pfam AP2 domain 16 67 IPR001471 GO:0003700|GO:0006355
Dod07g0671 167 SMART rav1_2 16 80 IPR001471 GO:0003700|GO:0006355
Dod07g0671 167 PRINTS Ethylene responsive element binding protein signature 17 28 IPR001471 GO:0003700|GO:0006355
Dod07g0671 167 PRINTS Ethylene responsive element binding protein signature 40 56 IPR001471 GO:0003700|GO:0006355
Dod07g0671 167 Gene3D AP2/ERF domain 15 75 IPR036955 GO:0003700|GO:0006355
Dod07g0671 167 PANTHER PATHOGENESIS-RELATED GENES TRANSCRIPTIONAL ACTIVATOR PTI5 12 85 - -
Dod07g0671 167 MobiDBLite consensus disorder prediction 85 101 - -
Dod07g0671 167 CDD AP2 16 75 IPR001471 GO:0003700|GO:0006355
Dod07g0671 167 ProSiteProfiles AP2/ERF domain profile. 16 74 IPR001471 GO:0003700|GO:0006355
Dod07g0671 167 PANTHER DNA-BINDING DOMAIN 12 85 IPR044808 GO:0003700|GO:0009873
Dod07g0671 167 SUPERFAMILY DNA-binding domain 16 75 IPR016177 GO:0003677
Dod07g0671 167 MobiDBLite consensus disorder prediction 74 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0671 Dod-Chr7 9252378 9253173 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0671 14 148 AP2-EREBP Transcription Factor Family AT3G23230 55.556 8.37e-37 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dod07g0671 AP2 1.2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0671 - - gsj:114381985 185.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2524 01 64335996 64336973 Dod07g0671 07 9252378 9253173 PCT