Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0670 ATGACCACCACCCCTTCTTTCTTTCAGAACCCAGATTGGGACATGTCGCATGATCCTTCAAACACTTTCTTCTTCGACTCGTTCTCAAGCAACAATTTTCATGACCCTGTCTGTGATTCCCTTTCCTTTGATATGGTTGACTTCTCCATGGATTCACAATCACAAGCACCAACGACAACAATAGGGAACAACAACAAGGAGTCAAAGCAGAAGCCTCAGGATGAAGAAGAAGTGCAAAAACACACTAATGAGGTAAGGTACATAGGTGTTAGAAGAAGGCCTTGGGGAAAATTTGCAGCTGAGATTAGAGACACAACAAGGAATGGTGCAAGGGTTTGGCTTGGAACCTTTGATAGGGCTGAGGATGCTGCTTTGGCTTATGACCAAGCTGCATTTACCATGAGACGCTACAACGCTGTGCTCAACTTCCCATTCAAAAGGGTCCAAGAATCTTTGCAAGAGATGGAGTATGGTTGCATCAAACTCAAAGGGTGTTCATCACCAGCACTTGCACTCAAGGAGAGGAACTACATGAGAAGAAAATCGTCATCAAAGACTAACAGTAGTAATAAAGCCAGTGCCAGAAAGTGTAAAGGGAAGAACAGTGATCAATCATCATCATCAGAGAAGCCATGTGTGATGGTGCTAGAGGACTTGGGAGTTGAATATCTGGAGCACCTTCTAAGCATGTCGGATCAAAGTGCAAGCCCTAGCTACTCGAAATAA 726 0.4408 MTTTPSFFQNPDWDMSHDPSNTFFFDSFSSNNFHDPVCDSLSFDMVDFSMDSQSQAPTTTIGNNNKESKQKPQDEEEVQKHTNEVRYIGVRRRPWGKFAAEIRDTTRNGARVWLGTFDRAEDAALAYDQAAFTMRRYNAVLNFPFKRVQESLQEMEYGCIKLKGCSSPALALKERNYMRRKSSSKTNSSNKASARKCKGKNSDQSSSSEKPCVMVLEDLGVEYLEHLLSMSDQSASPSYSK* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0670 241 MobiDBLite consensus disorder prediction 176 209 - -
Dod07g0670 241 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B 32 230 - -
Dod07g0670 241 CDD AP2 86 144 IPR001471 GO:0003700|GO:0006355
Dod07g0670 241 MobiDBLite consensus disorder prediction 53 67 - -
Dod07g0670 241 SMART rav1_2 86 150 IPR001471 GO:0003700|GO:0006355
Dod07g0670 241 PANTHER DNA-BINDING DOMAIN 32 230 IPR044808 GO:0003700|GO:0009873
Dod07g0670 241 Gene3D AP2/ERF domain 85 146 IPR036955 GO:0003700|GO:0006355
Dod07g0670 241 ProSiteProfiles AP2/ERF domain profile. 86 144 IPR001471 GO:0003700|GO:0006355
Dod07g0670 241 PRINTS Ethylene responsive element binding protein signature 87 98 IPR001471 GO:0003700|GO:0006355
Dod07g0670 241 PRINTS Ethylene responsive element binding protein signature 110 126 IPR001471 GO:0003700|GO:0006355
Dod07g0670 241 SUPERFAMILY DNA-binding domain 86 145 IPR016177 GO:0003677
Dod07g0670 241 MobiDBLite consensus disorder prediction 182 209 - -
Dod07g0670 241 Pfam AP2 domain 86 136 IPR001471 GO:0003700|GO:0006355
Dod07g0670 241 MobiDBLite consensus disorder prediction 53 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0670 Dod-Chr7 9181635 9185069 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0670 78 236 AP2-EREBP Transcription Factor Family AT3G23240 52.201 1.70e-46 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dod07g0670 AP2 2.2e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0670 K14516 - gmx:100811486 228.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g0670 07 9181635 9185069 Dod01g3546 01 76717381 76718525 ECH
Dod07g0670 07 9181635 9185069 Dod07g0670 07 9181635 9185069 ECH