Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0668 ATGACGACCACCACCCCTTCTTTCTTTCAGAACCCAGATTGGGACATGTCGCACGATCCTTCAAACACTTTCTTCTTCGACTCGTTCTCAAGCAACAATTTTCATGACCCTGTCTGTGATTCCCTTTCCTTTGATATGGTTGACTTCTCCATGGATTCACAATCACAAGCACCAACGACAACAATAGGGAACAACAACAAGGAGTCAAAGCAGAAGCCTCAGGAGGAAGAAGAAGTGCAAAAACACACTAATGAGGTAAGATACATAGGTGTTAGAAGAAGGCCTTGGGGAAAATTTGCAGCTGAGATTAGAGACACAACAAGGAATGGTGCAAGGGTTTGGCTTGGAACCTTTGACAGTGCTGAGGATGCTGCTTTGGCTTATGACCAAGCTGCATTTACCATGAGACGCTACAACGCTGTGCTCAACTTCCCAGTCAAAAGGGTCCAAGAATCTTTGCAAGAGATGGAGTATGGTTGCATCAACCTTGAAGGGTATTCATCACCAGCACTTGCACTCAAGGAGAGGAACTACATGAGAAGAAAATTGTCATCAAAGACTAACAGTAGTAATAAAGCCAGTGCCAGAAAGTGTAAAGGGAACAAGAGTGATCAATCATCATCATCAGAGAAGCCATGTGTGATGGTGCTGGAGGATTTGGGAGTTGAATATCTGGAGCACCTTCTAAGCATGTCGGATCAAAGTGCAGGCCCTAGCTACTCGAAATAA 729 0.4444 MTTTTPSFFQNPDWDMSHDPSNTFFFDSFSSNNFHDPVCDSLSFDMVDFSMDSQSQAPTTTIGNNNKESKQKPQEEEEVQKHTNEVRYIGVRRRPWGKFAAEIRDTTRNGARVWLGTFDSAEDAALAYDQAAFTMRRYNAVLNFPVKRVQESLQEMEYGCINLEGYSSPALALKERNYMRRKLSSKTNSSNKASARKCKGNKSDQSSSSEKPCVMVLEDLGVEYLEHLLSMSDQSAGPSYSK* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0668 242 Coils Coil 65 85 - -
Dod07g0668 242 MobiDBLite consensus disorder prediction 183 210 - -
Dod07g0668 242 MobiDBLite consensus disorder prediction 54 81 - -
Dod07g0668 242 SMART rav1_2 87 151 IPR001471 GO:0003700|GO:0006355
Dod07g0668 242 PRINTS Ethylene responsive element binding protein signature 88 99 IPR001471 GO:0003700|GO:0006355
Dod07g0668 242 PRINTS Ethylene responsive element binding protein signature 111 127 IPR001471 GO:0003700|GO:0006355
Dod07g0668 242 ProSiteProfiles AP2/ERF domain profile. 87 145 IPR001471 GO:0003700|GO:0006355
Dod07g0668 242 Gene3D AP2/ERF domain 86 147 IPR036955 GO:0003700|GO:0006355
Dod07g0668 242 CDD AP2 87 146 IPR001471 GO:0003700|GO:0006355
Dod07g0668 242 MobiDBLite consensus disorder prediction 182 210 - -
Dod07g0668 242 PANTHER DNA-BINDING DOMAIN 33 231 IPR044808 GO:0003700|GO:0009873
Dod07g0668 242 Pfam AP2 domain 87 137 IPR001471 GO:0003700|GO:0006355
Dod07g0668 242 SUPERFAMILY DNA-binding domain 87 146 IPR016177 GO:0003677
Dod07g0668 242 MobiDBLite consensus disorder prediction 54 68 - -
Dod07g0668 242 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B 33 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0668 Dod-Chr7 9141908 9145344 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0668 79 236 AP2-EREBP Transcription Factor Family AT3G23240 51.235 2.04e-47 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dod07g0668 AP2 2.2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0668 K14516 - gmx:100811486 223.016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g0668 07 9141908 9145344 Dod07g0668 07 9141908 9145344 ECH