Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0667 ATGACCACCACCCCTTCTTTCTTTCAGAACCCAGATTGGGACATGTCTCATGATCCTTCAAACACTTTCTTCTTCGAATCATTCTCAAGCAACAATTTTCATGACCCTATCCATGATTCCCTTTCCTTTGATATGGTTAACTTCTCCATGGATTCACAATCACAAGCACCAACAACAACAATAGGGAACAACAACAAGGAGTCAAAGCAGAAGCCTCAGGATGAAGAAGAAGTGCAAAAACACACTTATGAGGTAAGGTACATAGGTGTTAGAAGAAGGCCTTGGGGAAAATTTGCAGCTGAGATTAGAGACACAACAAGGAATGGTGCAAGGGTTTGGCTTGGAACCTTTGACAGTGCTGAGGATGCTGCTTTGGCTTATGACCAAGCTGCATTTACCATGAGAGGCTTCAACGCTGTGCTCAACTTCCCAGTCAAAAGGGTCCAAGAATCTTTGCAAGAGATGGAGTATGGTTGCATCAAACTCGAAGGGTGTTCATCACCAGCACTTGCACTCAAGGAGAGGAACTACATGAGAAGAAAATTGTCATCAAAGACTAACAGTAGTAATAAAGCCAGTGCCAGAAAGTGTAAAGGGAACAAGAGTGATCAATCATCATCATCAGAGAAGCCATGTGTGATGGTGCTGGAGGATTTGGGAGTTGAATATCTGGAGCACCTTCTAAGCATGTCGGATCAAAGTGCAAGCCCTAGCTGCTCCAAATAA 726 0.4353 MTTTPSFFQNPDWDMSHDPSNTFFFESFSSNNFHDPIHDSLSFDMVNFSMDSQSQAPTTTIGNNNKESKQKPQDEEEVQKHTYEVRYIGVRRRPWGKFAAEIRDTTRNGARVWLGTFDSAEDAALAYDQAAFTMRGFNAVLNFPVKRVQESLQEMEYGCIKLEGCSSPALALKERNYMRRKLSSKTNSSNKASARKCKGNKSDQSSSSEKPCVMVLEDLGVEYLEHLLSMSDQSASPSCSK* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0667 241 MobiDBLite consensus disorder prediction 53 77 - -
Dod07g0667 241 Gene3D AP2/ERF domain 85 146 IPR036955 GO:0003700|GO:0006355
Dod07g0667 241 ProSiteProfiles AP2/ERF domain profile. 86 144 IPR001471 GO:0003700|GO:0006355
Dod07g0667 241 MobiDBLite consensus disorder prediction 53 67 - -
Dod07g0667 241 MobiDBLite consensus disorder prediction 180 209 - -
Dod07g0667 241 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B 30 230 - -
Dod07g0667 241 CDD AP2 86 145 IPR001471 GO:0003700|GO:0006355
Dod07g0667 241 Pfam AP2 domain 86 136 IPR001471 GO:0003700|GO:0006355
Dod07g0667 241 PRINTS Ethylene responsive element binding protein signature 110 126 IPR001471 GO:0003700|GO:0006355
Dod07g0667 241 PRINTS Ethylene responsive element binding protein signature 87 98 IPR001471 GO:0003700|GO:0006355
Dod07g0667 241 SMART rav1_2 86 150 IPR001471 GO:0003700|GO:0006355
Dod07g0667 241 PANTHER DNA-BINDING DOMAIN 30 230 IPR044808 GO:0003700|GO:0009873
Dod07g0667 241 SUPERFAMILY DNA-binding domain 86 145 IPR016177 GO:0003677
Dod07g0667 241 MobiDBLite consensus disorder prediction 182 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0667 Dod-Chr7 9108523 9109248 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0667 84 236 AP2-EREBP Transcription Factor Family AT3G23240 54.248 6.02e-49 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dod07g0667 AP2 7.9e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0667 K14516 - gmx:100527364 237.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g0667 07 9108523 9109248 Dod07g0667 07 9108523 9109248 ECH