Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0663 ATGGCACTGATGAACCAGAACGACTACTCCTACAATCTTGGATATCAAGCTTTCTCACTCATCAAAACTCAGTCTAGTGCACTCCATAACCCACCACAGAAAAATTCAGACCATGCTTTTCCCATATTTGTCATTGTTGTGCTCAGCATCTTTGCCACTGCTTTCTTGCTCATGAGCTACTTCACTTTGTTGACCAAATGCTGCTCAAACTGGCACCAAGTTAACCCTTTGAGATGGATCTCCATCCTGAGATCTCAACAGAATGAAGAATCCTTCATAGCATTCTGTCCAACCAAGTGGAACCATGGCGTTGATGAATCTGTCATCAGAGAAATCCCAGCATTTCAGTTCACAAAAGGGGCAACAATTGAGGATCAAAGTGTGTATGGCTGCATGGTTTGTTTGACTGAGTTTCAAGAACATGATATGCTAAAGGTTCTTCCCATTTGTAGCCATGCCTTCCACTTGGATTGCATTGACATTTGGCTTCAGACCAATGCCAATTGCCCTCTTTGTAGATCAAGCATCTCAGGCAACACACATTGTCCAATTGACCATATCATAGCTCCAAGTTCTTCTCCTCAGGATTCTCAGTCACTTTCAGACAGGGGCAGTGATGAAGATTTTGTAGTCATTGAACTAGGAAGAGATCATGGGGGAGTACTACCACAGGTGCCACAAGAAAGAAATGACTCAATGGGAAGAATCATATCACAGAGTACAAATCAGTCTACAATGAAAGTGGAACATCAGAAGATTAATGGAAACTTGAAACCAAGGAAGTGCCACCATGTTTCCCTCGTGGGAGATGAGTGCATTGATGTCAGAAAGAAAGATGACCAGTTTTCTGTTCAGCCAATTAGAAGATCTTTCTCAATGGATTCTGCAAATCATAGACAGGTTTACTTAGATGTTCAAGCCATCATACAACAGAAGAGGCATCAGAATGAGGCTAGTGCCAGTGAGGATTGTAATAGCAAAGGAAGAAGATCATTCTTTCCATTTTGTTAA 1011 0.4174 MALMNQNDYSYNLGYQAFSLIKTQSSALHNPPQKNSDHAFPIFVIVVLSIFATAFLLMSYFTLLTKCCSNWHQVNPLRWISILRSQQNEESFIAFCPTKWNHGVDESVIREIPAFQFTKGATIEDQSVYGCMVCLTEFQEHDMLKVLPICSHAFHLDCIDIWLQTNANCPLCRSSISGNTHCPIDHIIAPSSSPQDSQSLSDRGSDEDFVVIELGRDHGGVLPQVPQERNDSMGRIISQSTNQSTMKVEHQKINGNLKPRKCHHVSLVGDECIDVRKKDDQFSVQPIRRSFSMDSANHRQVYLDVQAIIQQKRHQNEASASEDCNSKGRRSFFPFC* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0663 336 SUPERFAMILY RING/U-box 109 177 - -
Dod07g0663 336 SMART ring_2 131 172 IPR001841 -
Dod07g0663 336 PANTHER RING-H2 FINGER PROTEIN ATL16 6 336 IPR044600 GO:0016567|GO:0016740
Dod07g0663 336 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 93 179 IPR013083 -
Dod07g0663 336 ProSiteProfiles Zinc finger RING-type profile. 131 173 IPR001841 -
Dod07g0663 336 Pfam Ring finger domain 131 173 IPR001841 -
Dod07g0663 336 CDD RING-H2_PA-TM-RING 131 173 - -
Dod07g0663 336 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 6 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0663 Dod-Chr7 9022305 9023315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0663 31 315 C3H Transcription Factor Family AT1G04360 44.373 8.44e-72 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0663 K19041 - gmx:100809883 465.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g0663 07 9022305 9023315 Dod01g2522 01 64326321 64327552 PCT