Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0661 ATGAGATCTTCCTCAGAAGCTTCACCATCACCATCATGCAGATCGAAGAAACCCAATAATCTTCGAAGCTCCGAAAAAACCCTGTCTTCAGACCAAGTCACACTCAGCACCAAGACCCCTGACAAGCCCCCTGAGCTCACACGCCCCCACACGCGCCGCACGCGCAACCGCGGCGTCGTGCTCTCGTTGTCTGAGGTTCGGAAAGTGGCCGAAAGCCTTCAGGATCGCGGCGAGCCCGAAACGACGCCGTTTAGGGGCAAAACTGTAAGACGCGCGTTGCATTCGCCGTGTAAACCGAAAAAGACCAGTGCCAATGAACCCTTCAAGCTTCCCCAAAAGTATGAGATTTTGGGTGAGTTCTTTGATAGCTTGGATAGTTCGATTCGGTTGTTACGGTTGAAAGGATCAATGACTTCTTTCTCGAACATCAGCCCCAAGATTGAATGCTTAACTGATAGGAGGTTTACACATGGTCATTTGGCTCAGTTGAAATTTCTCTTGCCTGAGGCAATTGAGATTAAGAAGGTACTATTGTTCGATGAACGGACAAGTTGTATGAAGCCAGATCTTCATGTTACTATAAATCTTGATGCAGTGGAGTCTGATGAAAAGTCGGTACCTGAATGCGGCAGCAGCATGTCGCTGAGGAAGATGTTTCGATCACGGCTTGTAGACTTTTGTAAATCTCATCCTGAGGGTAATGAAATTCCGGAAGAAATACTGCCTGAGCCATTCAACCGCCTAAAGCAAGATCAACTTTCTGACATATTGAGAAGACCCTCCTCATCATTTACTACAGAGACATCATCTAGTGCTGATGCAGCTACTAATGGAGAAGACTCCTCAGTATCTGTGAGGACATCAATTGAATCACTTAACCAGAAACCAGCAGTAGCCTCTCACATGTCCAAATCATTCAAAAGGCGGTTTTCTCTGAAACCTAAGGAAAATGGAGCAGATCTTGCACAGGAAAAATTGCCATCAGATTCATTCCAATCCTTGGTTTTAGAGAAAGAACCCATCTCTGTTGGCAGTAGATCTGATCCTGATGTATTACCAGCAAAATTGTCTTCAGAAGTAGCTAGCAGTGAAGTATGCCCAACAGTTTGTGCTTCATCTGGTGCTCCGCCTGCCACTGCAAGCAAAACCATCGACAAAGATGGGCCTCTTAAAGACATTGGTGCGGTGTCAACTCCAGCTAAACTTGATTCAACCCCAGCTGAACTTGTTTCAACTCCAGCCAGACTGATGAGTGCCACACCAGCATTGCCTCCACCTAAGAGATCATTAATGAGCCCAGATGATAACTCTTCCCGTTCGCCTAACAAGTTGGCTAGGCGTCCACCTCGATCCAAATTGAAATTTGACACCCCTCTTAAAAACAAAGAGACAGAAAATGAAGATGATGATGGTGCCTTATCAATTGATGATGATGTTTTTGATATTCTGCCGGAGAGCCTTCTGCAATCGATTAGAGAAAAGGAAATAAAGGCAATGGAGGAAAGAAGTCCAGCTATCTCGCAAGCAAAGAGAAGGCAAAAAATGATTGCCAGGCTCCCTAAGCTCTTTAACATGATTCACCTCTTGTTTCAGCCAGTAAACCGATCGGTTATCACAAAAGAGGAGCTTGTAAGCAAGATAATCGCAGGCCATTGTGATATCGTTGACAGAAGAGAAGTTGAAGAACAGCTAAATTTGTTGCTAGAACTAGTGCCAGAATGGATTTCTGAGAAGCTGACCTCTAGTGGTGATTTCCTTTTCTGCATAAATAAAGTGGTGGATGCACAGACCATACGTACTACACTCGAAGAAGCGAAATGA 1821 0.4503 MRSSSEASPSPSCRSKKPNNLRSSEKTLSSDQVTLSTKTPDKPPELTRPHTRRTRNRGVVLSLSEVRKVAESLQDRGEPETTPFRGKTVRRALHSPCKPKKTSANEPFKLPQKYEILGEFFDSLDSSIRLLRLKGSMTSFSNISPKIECLTDRRFTHGHLAQLKFLLPEAIEIKKVLLFDERTSCMKPDLHVTINLDAVESDEKSVPECGSSMSLRKMFRSRLVDFCKSHPEGNEIPEEILPEPFNRLKQDQLSDILRRPSSSFTTETSSSADAATNGEDSSVSVRTSIESLNQKPAVASHMSKSFKRRFSLKPKENGADLAQEKLPSDSFQSLVLEKEPISVGSRSDPDVLPAKLSSEVASSEVCPTVCASSGAPPATASKTIDKDGPLKDIGAVSTPAKLDSTPAELVSTPARLMSATPALPPPKRSLMSPDDNSSRSPNKLARRPPRSKLKFDTPLKNKETENEDDDGALSIDDDVFDILPESLLQSIREKEIKAMEERSPAISQAKRRQKMIARLPKLFNMIHLLFQPVNRSVITKEELVSKIIAGHCDIVDRREVEEQLNLLLELVPEWISEKLTSSGDFLFCINKVVDAQTIRTTLEEAK* 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0661 606 PANTHER DNA REPLICATION FACTOR CDT1 18 606 IPR045173 GO:0003677|GO:0030174|GO:0071163
Dod07g0661 606 CDD Cdt1_c 482 603 IPR032054 -
Dod07g0661 606 Pfam DNA replication factor Cdt1 C-terminal domain 486 578 IPR032054 -
Dod07g0661 606 Gene3D - 477 606 IPR038090 -
Dod07g0661 606 MobiDBLite consensus disorder prediction 258 286 - -
Dod07g0661 606 MobiDBLite consensus disorder prediction 1 60 - -
Dod07g0661 606 CDD Cdt1_m 106 249 IPR014939 -
Dod07g0661 606 Pfam DNA replication factor CDT1 like 110 228 IPR014939 -
Dod07g0661 606 MobiDBLite consensus disorder prediction 1 41 - -
Dod07g0661 606 MobiDBLite consensus disorder prediction 449 468 - -
Dod07g0661 606 SUPERFAMILY "Winged helix" DNA-binding domain 103 245 IPR036390 -
Dod07g0661 606 SMART CDT1_2 110 243 IPR014939 -
Dod07g0661 606 MobiDBLite consensus disorder prediction 368 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0661 Dod-Chr7 9008682 9012444 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0661 39 604 Core DNA Replication Machinery Family AT2G31270 42.142 8.15e-109 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0661 K10727 - qsu:112033519 546.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g0661 07 9008682 9012444 Dod07g0661 07 9008682 9012444 ECH