Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0656 ATGGCTGGTTCCGGTTCTCCTTGTGGAGCCTGCAAGTTCTTGAGGAGGAAATGTGTGAGGGGTTGTGTTTTTGCACCTTACTTTTGCCATGAGCAAGGTGCTACCCATTTTGCAGCCATCCACAAGGTCTTTGGTGCAAGCAATGTCTCAAAGCTCCTTGCTCACCTTCCAGTTAGTGACAGGTGTGAAGCTGCAGTTACAATCTCATATGAAGCTCAAGCAAGGCTTCAAGACCCCATTTATGGTTGTGTCTCCCATATCTTTGCCCTCCAACAACAGGTGGTCAATTTACAAGCACAACTAGCTTGTCTCAAGGAACAAGCAGCTCAAAGTTGCGTCAATGCCTCAGCCAACGGAAACCCTAATGAGAGATACTTTGATGAAAAACCTGGCGCTAATTTCCACCAAGATCTTCAAAATTGGTTCCATGTGGAAAATTCCAACATGGGACTTGAAGCTCTTCCCAACTTATTGTGCAATAATTCCTCTGCAGCACAGTATCATAATGGGAACAATAGTGCTGTTCCCATGGATCTAAACCCTATTGGGAATTACTATGAAAATTCAGGAACCATGGATGAAAGCAGCTCATTTTCTAGCTTTGAAGAGAGTTCCAACTCCATGTGTTATGACATGCAAACAAATGGGAGGAAGTGGTCCTTTCATGAAGTGGATGACCTTCATTCAGTGGCTTTTGGTTACAGCCGATGA 711 0.443 MAGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLAHLPVSDRCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVNLQAQLACLKEQAAQSCVNASANGNPNERYFDEKPGANFHQDLQNWFHVENSNMGLEALPNLLCNNSSAAQYHNGNNSAVPMDLNPIGNYYENSGTMDESSSFSSFEESSNSMCYDMQTNGRKWSFHEVDDLHSVAFGYSR* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0656 236 PANTHER LOB DOMAIN-CONTAINING PROTEIN 17-RELATED 1 235 - -
Dod07g0656 236 Coils Coil 87 107 - -
Dod07g0656 236 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 235 - -
Dod07g0656 236 Pfam Lateral organ boundaries (LOB) domain 7 105 IPR004883 -
Dod07g0656 236 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0656 Dod-Chr7 8915107 8917655 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0656 7 234 AS2 family AT3G58190 53.043 5.90e-75 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Dod07g0656 LOB 1.6e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0656 K13945 - gmx:100776678 346.665
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g0656 07 8915107 8917655 Dod07g0656 07 8915107 8917655 ECH
Dod01g2515 01 64227437 64228663 Dod07g0656 07 8915107 8917655 PCT