Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0655 ATGGCTTCTGGAACTAGAAATGGCACTGGTGGCTCAGGATCTCCATGTGGGGCATGCAAGTTCCTAAGAAGGAAGTGTGCATCTGATTGCATCTTTGCTCCATACTTCAGCTCAGAACAAGGGCCTGCAAGATTTGCAGCAATCCATAAGGTTTTCGGTGCTAGCAATGTTTCCAAGCTGCTCTTGGATATTCCAGCTCATGATCGTTGTGAGGCAGTGCTCACAATTGCTTACGAGGCACAAGCTCGTATTAGAGACCCTGTCTATGGGTGTGTCTCTCATATTTTTTCCTTACAACAGCAGGTAGCATGCTTGCAAGCACAATTGATGCAAGTGAAGGCACAACTAGCTCAAAACCTGGTGGAATCTAGGAACTTGGATAATAATCAGTGGTCATCAGGGAATAATGTTGGAGGACAACCATTCAATCAATTTTGTCCCACTTACATGAACCCTATATCACCTCAGAGCTCACTTGAATCAATTGATCAAAGCAGCATCAGTGATGGAATTATGAGCATGCAAGGTATGCAAAGTAGGGAGGGTTTCTCATTCCAAGCTTGTTCTAAGAAAAGATCACACAACAATAATGATTTGGGTGAGCTGCAAGAACTGGCACTTAGGATGATGAGGAACTATAACTAG 645 0.4372 MASGTRNGTGGSGSPCGACKFLRRKCASDCIFAPYFSSEQGPARFAAIHKVFGASNVSKLLLDIPAHDRCEAVLTIAYEAQARIRDPVYGCVSHIFSLQQQVACLQAQLMQVKAQLAQNLVESRNLDNNQWSSGNNVGGQPFNQFCPTYMNPISPQSSLESIDQSSISDGIMSMQGMQSREGFSFQACSKKRSHNNNDLGELQELALRMMRNYN* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0655 214 Coils Coil 95 115 - -
Dod07g0655 214 PANTHER LOB DOMAIN CONTAINING PROTEIN 9 211 - -
Dod07g0655 214 Pfam Lateral organ boundaries (LOB) domain 15 113 IPR004883 -
Dod07g0655 214 ProSiteProfiles LOB domain profile. 14 116 IPR004883 -
Dod07g0655 214 PANTHER LOB DOMAIN-CONTAINING PROTEIN 16 9 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0655 Dod-Chr7 8894855 8896581 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0655 1 212 AS2 family AT2G42430 55.823 3.97e-82 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Dod07g0655 LOB 1.9e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0655 K13944 - gmx:100801508 322.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g0655 07 8894855 8896581 Dod07g0655 07 8894855 8896581 ECH
Dod01g2514 01 64206945 64209560 Dod07g0655 07 8894855 8896581 PCT