Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0650 ATGGAACTCAGCCACCCAGAAGACTCCAAGAGCTCAAGTGAAGAAACTGATCGATCACCCGAGCATATTAATGATCATCATGATGTGGGAGCTGGCAGAACCTATGAGTGTGTGTTTTGCAAGAGAGGCTTCACCACAGCACAAGCTTTGGGTGGACACATGAACATACACAGAAGAGATAGAGCCAGTAACAACAAGGCCAAACCCAATTTTGCATCTTCTAGTTCAAGCAAGGCAATTGATGCCAACTATGCAGATCTAGGGTACTATTCATCAATTCCAAGCCATCTTGCAAGAAGAGGGGATAACTATTTCACTACTGTTCCTGATCATGAGGTAGACACCAACAATAATTACCATCCAAGCTATTTCCCTCCAAACTCTTGTGGTACCACACCTTCTTCCCATGTGCACCATAATAGTGAGGTGTTGTGTGTAGAAACCCAAGGGGATAGGGGAAACTTGTTCGGACAAGATTGGAGGCAAAAGGGTTTGAGCTTGTACACTAATCCATTGGGTGTACATGAGAATACTGACAAGATAAAAGACGACAATAGTGAAGAGGATGGCCTGGATTTGGAGCTTAGACTTGGTCATCATCCAAAGCAATAA 612 0.4379 MELSHPEDSKSSSEETDRSPEHINDHHDVGAGRTYECVFCKRGFTTAQALGGHMNIHRRDRASNNKAKPNFASSSSSKAIDANYADLGYYSSIPSHLARRGDNYFTTVPDHEVDTNNNYHPSYFPPNSCGTTPSSHVHHNSEVLCVETQGDRGNLFGQDWRQKGLSLYTNPLGVHENTDKIKDDNSEEDGLDLELRLGHHPKQ* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0650 203 PANTHER OS07G0101800 PROTEIN 1 201 - -
Dod07g0650 203 ProSiteProfiles Zinc finger C2H2 type domain profile. 35 62 IPR013087 -
Dod07g0650 203 SUPERFAMILY beta-beta-alpha zinc fingers 33 61 IPR036236 -
Dod07g0650 203 MobiDBLite consensus disorder prediction 176 203 - -
Dod07g0650 203 ProSitePatterns Zinc finger C2H2 type domain signature. 37 57 IPR013087 -
Dod07g0650 203 Pfam C2H2-type zinc finger 35 59 - -
Dod07g0650 203 Gene3D Classic Zinc Finger 8 87 - -
Dod07g0650 203 MobiDBLite consensus disorder prediction 171 203 - -
Dod07g0650 203 MobiDBLite consensus disorder prediction 1 28 - -
Dod07g0650 203 PANTHER TRANSCRIPTIONAL REGULATOR TAC1-LIKE 1 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0650 Dod-Chr7 8832194 8832805 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0650 35 99 C2H2 Transcription Factor Family AT5G43540 50.746 3.25e-15 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Dod07g0650 zf-C2H2_6 1.9e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0650 - - gmx:102670484 234.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2509 01 64177104 64178199 Dod07g0650 07 8832194 8832805 PCT