Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0649 ATGAAGTCAAGCTTCAATATGAAGCTATTCTTGGATCGAAAATTCATAGAAGAAAGAAAAAGATCATGGAAGGAAACTACTGTGAACAGAAACACTCATAGAGATGATAGCTTCAGCTTTGAGGAGCATTCATGGGGAACTTCATGGCCAGCAAGAAACTATGCTTGCAGCTTTTGCAAGAGAGAGTTCAGGTCTGCTCAGGCTCTGGGAGGACACATGAATGTTCATAGGAGGGATAGGGCAAGGTTGAGGTCATCCTTATCTTCATGGGTTTCTGAGTGCCCTAAACCTAACCTTAGCACTAAGCCTAACCCAACTCTTCTTTCTCCATCACCTTCTTCATCACAATCTCCTTTATCTGATGAGCACTTGAATTGTGCAAATCTTTCTCCTCCACTTTGTAGCCCTTGTCTCGCATTGTCTTCTTCTTTCCCCTCCCCAGCTTCTACAATTGGAGATAAGAAACCAAGACTCACATCTTCACCTCAGCTTCCTCTTTTGAGTCCTCAAAGCATGGATGGCATGAGTAAAAACACAAGGAGTAGTGCTTTAATTGGAGTTGATGAGGACTATAAGGTTTTCAAGAACAATGAGCCGAACATTACATTGGAGTTGGGAATAGGATTGCTTAAACACCGAGAGGAGGAATTAGATTTGGAGCTTAGACTTGGTCATTCCTAG 681 0.4244 MKSSFNMKLFLDRKFIEERKRSWKETTVNRNTHRDDSFSFEEHSWGTSWPARNYACSFCKREFRSAQALGGHMNVHRRDRARLRSSLSSWVSECPKPNLSTKPNPTLLSPSPSSSQSPLSDEHLNCANLSPPLCSPCLALSSSFPSPASTIGDKKPRLTSSPQLPLLSPQSMDGMSKNTRSSALIGVDEDYKVFKNNEPNITLELGIGLLKHREEELDLELRLGHS* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0649 226 PANTHER TRANSCRIPTIONAL REGULATOR SUPERMAN 18 225 - -
Dod07g0649 226 PANTHER OS07G0101800 PROTEIN 18 225 - -
Dod07g0649 226 Pfam C2H2-type zinc finger 54 78 - -
Dod07g0649 226 SMART c2h2final6 54 76 IPR013087 -
Dod07g0649 226 ProSiteProfiles Zinc finger C2H2 type domain profile. 54 81 IPR013087 -
Dod07g0649 226 MobiDBLite consensus disorder prediction 148 178 - -
Dod07g0649 226 MobiDBLite consensus disorder prediction 91 122 - -
Dod07g0649 226 ProSitePatterns Zinc finger C2H2 type domain signature. 56 76 IPR013087 -
Dod07g0649 226 Gene3D Classic Zinc Finger 32 99 - -
Dod07g0649 226 SUPERFAMILY beta-beta-alpha zinc fingers 51 80 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0649 Dod-Chr7 8803924 8804770 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0649 41 224 C2H2 Transcription Factor Family AT3G23130 40.000 1.67e-25 97.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Dod07g0649 zf-C2H2_6 6.3e-07 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0649 - - gmx:102662947 210.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2508 01 64161706 64162380 Dod07g0649 07 8803924 8804770 PCT