Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0645 ATGATTTGGGGCGATGGCCATTGTCGCAATCCCAAAGGAGGTGCGGCCGGAGGGGCCAACTCGCGAGCTGAGGGTGAAAGGAGTGGTGCAGTTGGGAAGGATTATAAGGAAGAGGTGAGAAAGAAGGTGCTGCAGAAGCTTGATGCTTGCTTTGCTGGGTTTTTGTCAAAAGAGGCTAATTATGCAAGGTTGGACAGGGTCTCGGATTTGCAAATGTTTTACTTGGCATCGATGTGTTACATATTCGGTTTTGATTCGCCGTGTGGCCCGGGTTGTTCTTTCAAGTCTGGTAAACCAGTATGGGCTTCTGATGCTGCTAGCTGTTTGAACCAATTAGAATCTAGATCGTTTTTGGGGAAATTGGCCGGTCTTCACACAGTTGTTTTTGTACCTCTTAAAGCTGGGGTTGTTGAGCTTGGCTCGATGGAAACAGTGCCTGAAGAGCAGGTTGTTTTGGACATGGTAAGGACAACATTCGGGGAATCTAGTCCCGGACAGGCAAAGGGGTTTCCCAAGATTTTCGGGCGTGAGTTAAGCCTGGGGGACACAAAATCTCAGTCCATAAGTATTAGTTTCTCGCCCAAGGTGGAAGATGATTCCGGTTTCACTTCAGACTCCTACGAAGTCCAAGCACTAGGGGCAACTCATGCTTATGGGAACTCTTCCAATGGGAGTATAGGTGACAGCAACGAAGCAAAATTGTTCCCTCAGTTAAATCCAATGACTGGTGGGAATTTCAATGCTCAAGTGAGGGTTTCTCCTCCAGATCTCGGTAATGAGGACTCATCCTCAGCTCATCCAGATGAACGCAAGCCCAGGAAAAGAGGTAGAAAGCCTGCAAATGGGAGAGAGGAGCCGCTGAATCACGTTGAAGCAGAGAGACAGAGACGGGAGAAGCTTAACCAAAGGTTCTACGCCTTGAGAGCTGTTGTTCCCAACATATCTAAAATGGACAAGGCATCTCTTCTTGGTGATGCCATAACCTATATCACTGATCTCCAGATGAAGATCAAGGTGTTGGAAGCGGAGAAGAACATGATTAACGGCAAGGAACAAATGTTGCCGTTCCCGGATTTTGATTTTCAAGCTAGAGAGGACGATGCAGTCGTGCGAGTGAGCTGCCCTTTGGATGTTCACCCGGTTTCCGGAGTTGTTAAGACATTCTGGGAGCATCACATTGTGGCTCAGGAGTCCAATGTTTCAACATCAGATGGGAAGGTAATTCATACATTCTCCATAAGAACTCAGGGTGGGGAGGCCGCTGCAATACAGTTGAAGGAAAAACTTGAAGCATCCCTATCCAAAAAGTAA 1311 0.4744 MIWGDGHCRNPKGGAAGGANSRAEGERSGAVGKDYKEEVRKKVLQKLDACFAGFLSKEANYARLDRVSDLQMFYLASMCYIFGFDSPCGPGCSFKSGKPVWASDAASCLNQLESRSFLGKLAGLHTVVFVPLKAGVVELGSMETVPEEQVVLDMVRTTFGESSPGQAKGFPKIFGRELSLGDTKSQSISISFSPKVEDDSGFTSDSYEVQALGATHAYGNSSNGSIGDSNEAKLFPQLNPMTGGNFNAQVRVSPPDLGNEDSSSAHPDERKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVPNISKMDKASLLGDAITYITDLQMKIKVLEAEKNMINGKEQMLPFPDFDFQAREDDAVVRVSCPLDVHPVSGVVKTFWEHHIVAQESNVSTSDGKVIHTFSIRTQGGEAAAIQLKEKLEASLSKK* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0645 436 MobiDBLite consensus disorder prediction 1 30 - -
Dod07g0645 436 Coils Coil 426 436 - -
Dod07g0645 436 MobiDBLite consensus disorder prediction 219 295 - -
Dod07g0645 436 Coils Coil 330 350 - -
Dod07g0645 436 MobiDBLite consensus disorder prediction 262 295 - -
Dod07g0645 436 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 287 355 IPR036638 GO:0046983
Dod07g0645 436 SMART finulus 290 339 IPR011598 GO:0046983
Dod07g0645 436 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 2 159 IPR025610 -
Dod07g0645 436 PANTHER TRANSCRIPTION FACTOR BHLH3 1 435 - -
Dod07g0645 436 Gene3D - 277 349 IPR036638 GO:0046983
Dod07g0645 436 MobiDBLite consensus disorder prediction 219 249 - -
Dod07g0645 436 PANTHER MYC 1 435 IPR045084 GO:0003700|GO:0006355
Dod07g0645 436 CDD bHLH_AtAIB_like 281 344 - -
Dod07g0645 436 Pfam Helix-loop-helix DNA-binding domain 288 334 IPR011598 GO:0046983
Dod07g0645 436 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 284 333 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0645 Dod-Chr7 8615178 8617593 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0645 1 435 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G16430 49.773 3.40e-137 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dod07g0645 bHLH-MYC_N 6.5e-28 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0645 - - gmx:100819968 660.988