Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0636 ATGTCGACGGAAGAGCCCACTGTTGTAGCGGAAACTGCACCCGAACCCGAACCAACCAACGCCGAACCTCCAAATGAAGAGACAAACGAGCCCGAGCCTGAAGCAGACACCAAGGCTAAGAAAACCAAGGAACCCAAACCTAGAAAAGCCTCATCCAAGCCTAGAAACCCTCCCACTCATCCTCCATACGAAGAGATGATTAAGGATGCGATTGTGACCTTGAAGGAGAAGACAGGTTCGAGCCAATACGCGATCCAGAAGTTCGTCGAGGAGAAGCACAAGCAGCTTCCACCGAACTTCAGGAAGCTCTTGTTGTTCCATTTGAAGAAGCTCGTAGCTTCTGGAAAGCTCGTTAAGGTTAAAAACTCTTATAAGCTTCCAGCAGCGAAGTCGCCAGCTGCGACATCAACAAAGAAAAAGCCCAAGCCCGCTTCTGCCAAGCCCAAGCCCAAACAGGCTTCTAAGGCTAAGGTTGCAAAACCTAGAAAACCCGCATCTTCAGCTAAATCAGCCGCCACTAAGTCAAAGCCCAAGCCTAAGCCCAAAGTTGTGGCTAAACCTAAGGCTGCCGCAAAGCCCAAAGCTGCTGCTGCCGCCAAGCCCAAAGCGAAGCCCAAGACAGTTGCTAAGCCTCCGGTGAAGGCTGCAAGGACGTCGACGAGGACATCGCCAGGGAAGAAGGCCCCTGCTGCGAAGCCGGCGGCGAAGAGGGCTGCGACGGGGAAGAAGGCGACGAAGAAGGCTGCGACGGCGGTGAAGAGGGCGCCGTTGAAGAGGGCTGCGACGGCGGTGAAGAAGGCGCCGTTGAAGAGGGCCGCGACGGTGAAGAAGGCGCCGAAGAGGGCTACGACGGCAAAGAGATCGTTGAAGTGA 873 0.5498 MSTEEPTVVAETAPEPEPTNAEPPNEETNEPEPEADTKAKKTKEPKPRKASSKPRNPPTHPPYEEMIKDAIVTLKEKTGSSQYAIQKFVEEKHKQLPPNFRKLLLFHLKKLVASGKLVKVKNSYKLPAAKSPAATSTKKKPKPASAKPKPKQASKAKVAKPRKPASSAKSAATKSKPKPKPKVVAKPKAAAKPKAAAAAKPKAKPKTVAKPPVKAARTSTRTSPGKKAPAAKPAAKRAATGKKATKKAATAVKRAPLKRAATAVKKAPLKRAATVKKAPKRATTAKRSLK* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0636 290 MobiDBLite consensus disorder prediction 1 67 - -
Dod07g0636 290 PRINTS Histone H5 signature 204 223 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Dod07g0636 290 PRINTS Histone H5 signature 73 90 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Dod07g0636 290 PRINTS Histone H5 signature 182 199 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Dod07g0636 290 PRINTS Histone H5 signature 150 164 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Dod07g0636 290 PRINTS Histone H5 signature 46 67 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Dod07g0636 290 PANTHER HISTONE H1.1 2 261 - -
Dod07g0636 290 MobiDBLite consensus disorder prediction 116 290 - -
Dod07g0636 290 SUPERFAMILY "Winged helix" DNA-binding domain 54 130 IPR036390 -
Dod07g0636 290 SMART h15plus2 57 123 IPR005818 GO:0000786|GO:0003677|GO:0006334
Dod07g0636 290 MobiDBLite consensus disorder prediction 239 253 - -
Dod07g0636 290 MobiDBLite consensus disorder prediction 270 290 - -
Dod07g0636 290 Gene3D - 55 147 IPR036388 -
Dod07g0636 290 PANTHER HISTONE H1 2 261 - -
Dod07g0636 290 CDD H15 57 135 IPR005818 GO:0000786|GO:0003677|GO:0006334
Dod07g0636 290 Pfam linker histone H1 and H5 family 60 125 IPR005818 GO:0000786|GO:0003677|GO:0006334
Dod07g0636 290 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 59 128 IPR005818 GO:0000786|GO:0003677|GO:0006334
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0636 Dod-Chr7 8500991 8503246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0636 61 155 Single Myb Histone (SMH) Gene Family AT1G72740 36.842 1.31e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0636 K11275 - gmx:100795994 138.658