Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0632 ATGTATGTTGGTTGGTTGTTGAACATTCAGGCGGATGTGGAGACAACAGAGGCGGGAGTGCCGAAGAAGAGGACGTTCAAGAAGTTCAGCTTCAGAGGCGTCGATCTCGATGCCCTCTTGGACATGTCCACCGATGAGCTCGTCAAGCTTTTCTCTGCTCGTGCCCGCAGAAGGTTTCAACGAGGTTTGACCCGCAAACCTATGGCACTCATCAAGAAGCTGCGTAAGGCGAAACGGGAAGCCCCACCTGGTGAGAAGCCGGAGCCTGTAAGGACTCACCTCCGCAACATGATCATTGTTCCTGAGATGATTGGCAGCATCATTGGTGTTTACAATGGGAAGACCTTCAACCAGGTTGAAATTAAACCAGAAATGATTGGCCACTATCTAGCTGAATTCTCAATCTCTTACAAGCCTGTTAAGCACGGGAGGCCTGGTATTGGTGCTACTCACTCTTCAAGAATCACTTTTGTGTTCGGCGCCCGAAGCCTGTGCAGCAGCCCCGCGGCAGTAGTTCCACGCGCCTCCGCGCTCCACGCGACGGAGAAGAAGGCGCACGAACGAAACAACAGCACGAAGAACCGAATCTCGCGGAGGATACTCAAATCGCGCACGCGAAGTAGTCCGTTGCACGCGCTTCAAGGTTTTGTAGAACAAGGCAATAGGCTTTCGCACTCCGAGCTCAGACGCATTGTTCGAAGCCTCGTCAAATCGAGGCGCTACCTTCACGCGCTTGAGGTAATGAAATGGATGGAAAAAAACCAGGAGGATTTCTGTATGACCCCAACTGATCATGCTATGAAATTGGAATTAATCATTAAAAATTATGGTCCAATGGAAGCTGAAGAATACCTTATCAGTATACCCAACTCAGCTGCAAAGAAAGCTGCCTGTCTCTCGCTTCTACGTGCCTATGTATGCGATAGGGACACCAGTAAAGCTGAAACTTTCATGGTGAAGCTCTATGAACTGGGGCTAGTGGTTAGCCCTCACCCTTATAACTGA 1005 0.4995 MYVGWLLNIQADVETTEAGVPKKRTFKKFSFRGVDLDALLDMSTDELVKLFSARARRRFQRGLTRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRITFVFGARSLCSSPAAVVPRASALHATEKKAHERNNSTKNRISRRILKSRTRSSPLHALQGFVEQGNRLSHSELRRIVRSLVKSRRYLHALEVMKWMEKNQEDFCMTPTDHAMKLELIIKNYGPMEAEEYLISIPNSAAKKAACLSLLRAYVCDRDTSKAETFMVKLYELGLVVSPHPYN* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0632 334 PRINTS Ribosomal protein S19 family signature 112 124 IPR002222 GO:0003735|GO:0005840|GO:0006412
Dod07g0632 334 PRINTS Ribosomal protein S19 family signature 124 139 IPR002222 GO:0003735|GO:0005840|GO:0006412
Dod07g0632 334 PRINTS Ribosomal protein S19 family signature 92 111 IPR002222 GO:0003735|GO:0005840|GO:0006412
Dod07g0632 334 TIGRFAM uS19_arch: ribosomal protein uS19 26 155 IPR005713 GO:0003735|GO:0006412|GO:0015935
Dod07g0632 334 PANTHER RIBOSOMAL PROTEIN S19P FAMILY MEMBER 13 155 IPR002222 GO:0003735|GO:0005840|GO:0006412
Dod07g0632 334 SUPERFAMILY Ribosomal protein S19 62 143 IPR023575 GO:0003735|GO:0005840|GO:0006412
Dod07g0632 334 Gene3D 30s Ribosomal Protein S19; Chain A 15 158 IPR023575 GO:0003735|GO:0005840|GO:0006412
Dod07g0632 334 Hamap 30S ribosomal protein S19 [rpsS]. 55 148 IPR002222 GO:0003735|GO:0005840|GO:0006412
Dod07g0632 334 PANTHER BNAA03G55820D PROTEIN 13 155 - -
Dod07g0632 334 Pfam Ribosomal protein S19 57 142 IPR002222 GO:0003735|GO:0005840|GO:0006412
Dod07g0632 334 ProSitePatterns Ribosomal protein S19 signature. 112 136 IPR020934 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0632 Dod-Chr7 8477970 8485242 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0632 11 154 Cytoplasmic Ribosomal Protein Gene Family AT5G09500 87.500 1.60e-88 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0632 K02958 - csv:101217711 275.789