Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0618 ATGGAAATTGGCCTGAATAAGAAGGAGGAGAAGATGGTGTTTGAAGAAACTGAGCTGAGGCTGGGGCTGCCTGGAAATAACAAGAAGAAGAAGAATGGAGGCACTGCAGCCACTGCTGAAGGAGGAGAAGTTGTGATGAGGAAGAGAGGATTCTCCGACACTGAGACTGAGAGTGTGGACTTGATGCTGAATCTCTCCTCCAAGAAGAAGGAAGCAAATGCTAATAATGGAGCAGATCCATGTGACAAGCCCAAGACTTCACCTAAGGAGAAGGCACTTTTGCCTTCTGATCCCGCCAAGCCTCCTGCTAAGGCGCAAGTGGTGGGTTGGCCACCCGTAAGGTCATACCGGAAGAACATGTTTGCGACTCAGAATCAAAAGAGCAGCGGCGGAGAGGAGAGCGAGAAGAAGAGCAGCCCTAACAATGGTTTGTTAATAAGCTTTGTGAAAGTGAGCATGGATGGAGCACCTTACCTCCGCAAAGTGGACTTGAAGATCTACAACAGTTACCCACAGCTCTCTGAAGCCTTGGGCACAATGTTTAGCTCCTTCACCATTGGAAGTTGTGAATCCCAAGGCATGAAGGATTTCATGAATGAGAGTAAGCTGATGGATCTCTTGAACAGCTCCGATTATGTCCCAACCTATGAAGATAAGGATGGAGACTGGATGCTTGTCGGTGATGTCCCATGGGAGATGTTCGTTGAATCATGCAAGCGTTTGCGTATCATGAAAGGAAAAGAGGCAATTGGACTGGCACCTAAAGTCATGGAGAAATGCAAGAACAGGAGCTAG 795 0.478 MEIGLNKKEEKMVFEETELRLGLPGNNKKKKNGGTAATAEGGEVVMRKRGFSDTETESVDLMLNLSSKKKEANANNGADPCDKPKTSPKEKALLPSDPAKPPAKAQVVGWPPVRSYRKNMFATQNQKSSGGEESEKKSSPNNGLLISFVKVSMDGAPYLRKVDLKIYNSYPQLSEALGTMFSSFTIGSCESQGMKDFMNESKLMDLLNSSDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGLAPKVMEKCKNRS* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0618 264 Gene3D - 144 258 - -
Dod07g0618 264 MobiDBLite consensus disorder prediction 22 107 - -
Dod07g0618 264 PANTHER AUXIN-INDUCED PROTEIN AUX28 8 257 - -
Dod07g0618 264 Pfam AUX/IAA family 16 255 IPR033389 -
Dod07g0618 264 MobiDBLite consensus disorder prediction 57 73 - -
Dod07g0618 264 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 8 257 IPR003311 GO:0005634|GO:0006355
Dod07g0618 264 SUPERFAMILY CAD & PB1 domains 148 245 - -
Dod07g0618 264 ProSiteProfiles PB1 domain profile. 146 246 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0618 Dod-Chr7 8309178 8313662 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0618 147 256 B3 DNA Binding Superfamily AT3G61830 30.909 9.02e-07 47.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Dod07g0618 AUX_IAA 4.1e-86 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0618 K14484 - gmx:100780214 359.377