Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0615 ATGGCGAGTCACCATCCCTCGGAGGCTCCCGCCGCCGACGACTTCCTCGAGCAAATCCTTGGCCTACCGACCTTCGCCTCCGCCGATTCCTCCCTCGCCGGAACCGACGCCTCTGCCTTGGCCGCCGCCGCAGCAGCCGCGGCGGCTTCGCCGGCGCCGATGATGCTGCAGCTCAGCTCCAGCGGCGATGCCTCAGCTCACCTCGTCGGCGGCGGCGGTCGGTTCCACGCGCCGGTGTACCAGCTTGGGCTGAGCTTGGAGCAAGGGAAAGGCGGAGGAGGAGGAGGGTTCTTGAAGCCGGAGGATGCTTCCGGAAGTGGAAAACGGTTTCGCGATGATATTGTTAATGTTGATGGCAGAGCTAAGAATGTCTTTCATGGGCAACCCATGTCTGCTACTACCATTCCTTCTGCTCCACATCCACCAGCAATGCGTCCTAGGGTGCGGGCTCGCAGAGGACAGGCTACAGATCCACACAGCATCGCTGAAAGGCTGCGCAGAGAAAGAATAGCTGAAAGAATCAGGGCTTTGCAAGAATTGGTTCCCAGTGTTAACAAGACTGATAGAGCTGCCATGCTTGATGAAATTGTGGACTACGTCAAGTTTTTAAGGCTTCAAGTGAAGGTATTGAGCATGAGTAGGCTGGGCGGAGCTGGTGCAGTGGCGCCGCTGGTAACTGACATCCCATTATCGTCAGTCGAGGTAATTGTTCTGACGAGTGTGTTGTTACACAAAATTTGCTTTTCTGTCAAACAATTTATCAAATTCAGTATTGAACAGGAAGAAGGCAGTGAGGGTGGAAGAAACCAACCAGCTTGGGAGAAGTGGTCAAATGATGGCACAGAAAGGCAAGTAGCTAAGCTAATGGAAGAAAATGTTGGGGCAGCCATGCAGTTCCTTCAATCAAAGGCACTCTGCATCATGCCTATCTCACTGGCATCAGCAATATACCAGTCACAACCACCAGACACTTCAAGTATAGTTAAGCCTGAAACTAATCCTCCTTCATAG 1011 0.5321 MASHHPSEAPAADDFLEQILGLPTFASADSSLAGTDASALAAAAAAAAASPAPMMLQLSSSGDASAHLVGGGGRFHAPVYQLGLSLEQGKGGGGGGFLKPEDASGSGKRFRDDIVNVDGRAKNVFHGQPMSATTIPSAPHPPAMRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEVIVLTSVLLHKICFSVKQFIKFSIEQEEGSEGGRNQPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLASAIYQSQPPDTSSIVKPETNPPS* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0615 336 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 8 233 - -
Dod07g0615 336 Pfam Helix-loop-helix DNA-binding domain 159 203 IPR011598 GO:0046983
Dod07g0615 336 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 8 233 - -
Dod07g0615 336 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 152 213 IPR036638 GO:0046983
Dod07g0615 336 Gene3D - 149 211 IPR036638 GO:0046983
Dod07g0615 336 MobiDBLite consensus disorder prediction 90 109 - -
Dod07g0615 336 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 260 325 - -
Dod07g0615 336 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 154 203 IPR011598 GO:0046983
Dod07g0615 336 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 260 325 - -
Dod07g0615 336 SMART finulus 160 209 IPR011598 GO:0046983
Dod07g0615 336 MobiDBLite consensus disorder prediction 127 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0615 Dod-Chr7 8258590 8263634 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0615 75 335 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 73.106 2.61e-115 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dod07g0615 HLH 1.3e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0615 - - cpap:110814765 402.134