Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0599 ATGTTCCCAGCAGTTATGTCCAATTCCACTTCTTTGTCTGAAGAAGCCAGTGTCTCTTCTGGCACAAGAATTCAAGACTTGGGTGGTTTAAATCATGTAGTATCAACCAATATTCTTCCTCAGCAGCAACCCCAAAAGATCAAGAAAAAGAGAAGCCTTCCTGGAAATCCAGACCCAGATGCTGAAGTGATTGCTTTATCCCCAAAGACCCTTCTAGCCACCAATAGGTTTGTGTGTGAGATCTGCAACAAGGGTTTCCAGAGGGATCAGAACCTTCAGCTTCATAGGAGAGGCCACAACCTGCCATGGAAGCTGAAGCAAAGGAACAGCAAAGAGGTCAAGAAGAGAGCCTACGTTTGCCCTGAGCCCTCATGTGTTCACCACAACCCATCAAGGGCTCTTGGTGATCTCACAGGAATCAAGAAACACTACTGCAGAAAACATGGTGAGAAGAAGTGGAAGTGTGACAAGTGCTCAAAGATCTATGCTGTTCAGTCAGATTGGAAAGCTCACTCTAAAACTTGTGGTACAAGAGAATATAGATGTGATTGTGGAACCCTTTTCTCCAGGAAGGACAGCTTCATAACCCATAGAGCATTCTGTGATGCATTGGCTGAAGAAAGTGCAAGGCTTTCAGCAAACCAATTAATCACACCCACAAACCCACTAGTCCATTCCCTCTTCCTTTTCCCAACCCAACAACAAAGCTTCCAAAACCGTATCACCACCACCACCACCATCAACAACAACAACAATCTCTGGGACCCATGTCAAGAAAACCCTAACCCTAGCATCATCAACAACAATAACAACAACCTTGCTGCTGCTGCTGCTTCTATCCTCCACAACATCAAGCCTGAAGTTCAAAACTTTCACATCCCAAACAACAACACCCTCTCTTCTTCTCCACCCACATTATTCCTTCAACACCCTAAGAACAACAACAACGTGATGATAACCTCACCCTTTAGGAACCCACACGTGCGCATGCAACCACACTCCAATGCTGCTGCCACGTCTGCACACCTCTCAGCCACTGCACTTCTCCAGAAGGCCGCAACCGTCGGCGCCGCCGCCATCACGGGCCGTAATGCTTCCCTTGAAGTTGGCCAGCAGCACGTGACCGAGTTCGGGGGAACCGTGACTCAGCTGGACGCGGTGGCAGTACCTCATCATCATCACTACATGAACAATATGGTCGGAGGGTTCAACAACAACAACACAAGGAGCCTCAAGAGTAGTGACGATCTCACAAGGGACTTTCTGGGGCTAACCAATGATGCCAACGGCGCCGGCGCCGGCGGAGGAAACGGTGGTGCGATTGACGTTAGCATGAATGTGAAGGACATGCTAACGTTCACAGGGAGCGTAGATTACCAACAACATCATCAGCACCCATTGTTCAAGTCACAACAGGGTTTTGGGTTCCTTGGGACAACCACTGCTCCCCAGTCATGGCGCAATTGTTGA 1470 0.485 MFPAVMSNSTSLSEEASVSSGTRIQDLGGLNHVVSTNILPQQQPQKIKKKRSLPGNPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRNSKEVKKRAYVCPEPSCVHHNPSRALGDLTGIKKHYCRKHGEKKWKCDKCSKIYAVQSDWKAHSKTCGTREYRCDCGTLFSRKDSFITHRAFCDALAEESARLSANQLITPTNPLVHSLFLFPTQQQSFQNRITTTTTINNNNNLWDPCQENPNPSIINNNNNNLAAAAASILHNIKPEVQNFHIPNNNTLSSSPPTLFLQHPKNNNNVMITSPFRNPHVRMQPHSNAAATSAHLSATALLQKAATVGAAAITGRNASLEVGQQHVTEFGGTVTQLDAVAVPHHHHYMNNMVGGFNNNNTRSLKSSDDLTRDFLGLTNDANGAGAGGGNGGAIDVSMNVKDMLTFTGSVDYQQHHQHPLFKSQQGFGFLGTTTAPQSWRNC* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0599 489 ProSiteProfiles Zinc finger C2H2 type domain profile. 77 99 IPR013087 -
Dod07g0599 489 SUPERFAMILY beta-beta-alpha zinc fingers 76 173 IPR036236 -
Dod07g0599 489 MobiDBLite consensus disorder prediction 1 20 - -
Dod07g0599 489 PANTHER PROTEIN INDETERMINATE-DOMAIN 12 8 467 - -
Dod07g0599 489 SMART c2h2final6 118 148 IPR013087 -
Dod07g0599 489 SMART c2h2final6 153 173 IPR013087 -
Dod07g0599 489 SMART c2h2final6 77 99 IPR013087 -
Dod07g0599 489 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 8 467 - -
Dod07g0599 489 ProSitePatterns Zinc finger C2H2 type domain signature. 79 99 IPR013087 -
Dod07g0599 489 MobiDBLite consensus disorder prediction 39 61 - -
Dod07g0599 489 Gene3D Classic Zinc Finger 56 125 - -
Dod07g0599 489 Gene3D Classic Zinc Finger 146 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0599 Dod-Chr7 7940216 7945252 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0599 2 459 IDZ Gene Family AT3G50700 46.186 1.55e-116 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Dod07g0599 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0599 K25870 - gmx:100780056 592.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g0599 07 7940216 7945252 Dod01g2453 01 63482964 63487609 PCT