Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0598 ATGAACTATATGTACCATGTGAAAGAGGAGTACATAGAACCATTATCATCATTTCAATCAGAAGGTGAATACCAACCAATGGTTCTTCCAGCTCCACAGCCAATGGAGGGGCTTCAGGACATAGGACCACCACCATTCCTGACCAAAACTTTTGATGTGGTGGATGACCCAACTACCAACCATGTAGTTTCATGGAGCAGAGGTGGCACCAGCTTTGTTGTTTGGGATCCGCATGCTTTCTCCATAGGTCTCTTACCCAGATACTTCAAGCACAACAACTTCTCAAGCTTTGTCAGGCAACTCAACACTTATGGTTTTAGAAAGATTGATCCAGATAGATGGGAATTTGCAAATGAAGGATTCCTCAGAGGGCACAGGCACTTGTTGAGGAGCATGAGGAGAAGGAAGGCACTTTCTAATCAGCCTAGTCATTCCCAACAAGGCCAGGTTGATCACTGTGTTGAGCTTGGGCGTTTTGGACTAGATGAAGAGATCGATCGATTGAGGCGCGACAAGAGGGTATTGATGATGGAGCTAGTGAATTTAAGACAGCAGCAACAGAACACCACAGTGTACATTCAGGAGATGGAGCAAAGGTTACAAGGGACAGAAGTTAAGCAGAAACAAATGATGGCATTCTTAGCTCGAGCCATGAAGAACCCTGCATTTATCCAGCAACTAGTCCAACAGAAAGGGAAGAGAATGGGGATTGAAGAAGACATGAATAGAAAGAGGGGAAGGCCAGTTGAGCAAGGAGAATCAATAAGTGAAGGTGAAGGAACAAGGAGCAGAGTTAAAGTTGAGAAATTTGAATATGGGGTGTCAGAGTTGGAAGTGCTGGCTATGGAAATGCAAGGTATTAGTAGAGGGAGGAGAGGAAAGGAGGAAGAACCACAAGAGAGGATTATTGACAGAGAACTTGATGAAGGGTTCTGGGAAGAACTACTTTTTAGTGAGAAATTTGAGGGTCAATTAGACATTCCAAATATTGAAGATGAAGAAGAAGATGAAGATTAG 1017 0.4356 MNYMYHVKEEYIEPLSSFQSEGEYQPMVLPAPQPMEGLQDIGPPPFLTKTFDVVDDPTTNHVVSWSRGGTSFVVWDPHAFSIGLLPRYFKHNNFSSFVRQLNTYGFRKIDPDRWEFANEGFLRGHRHLLRSMRRRKALSNQPSHSQQGQVDHCVELGRFGLDEEIDRLRRDKRVLMMELVNLRQQQQNTTVYIQEMEQRLQGTEVKQKQMMAFLARAMKNPAFIQQLVQQKGKRMGIEEDMNRKRGRPVEQGESISEGEGTRSRVKVEKFEYGVSELEVLAMEMQGISRGRRGKEEEPQERIIDRELDEGFWEELLFSEKFEGQLDIPNIEDEEEDED* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0598 338 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-6B 16 337 - -
Dod07g0598 338 SMART hsfneu3 42 135 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod07g0598 338 Gene3D - 39 136 IPR036388 -
Dod07g0598 338 SUPERFAMILY "Winged helix" DNA-binding domain 42 135 IPR036390 -
Dod07g0598 338 PRINTS Heat shock factor (HSF) domain signature 97 109 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod07g0598 338 PRINTS Heat shock factor (HSF) domain signature 84 96 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod07g0598 338 PRINTS Heat shock factor (HSF) domain signature 46 69 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod07g0598 338 ProSitePatterns HSF-type DNA-binding domain signature. 85 109 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod07g0598 338 Pfam HSF-type DNA-binding 46 135 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod07g0598 338 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 16 337 IPR027725 -
Dod07g0598 338 Coils Coil 165 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0598 Dod-Chr7 7922293 7924928 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0598 26 316 HSF AT3G22830 52.553 1.26e-114 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Dod07g0598 HSF_DNA-bind 1.6e-30 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0598 K09419 - gmx:100794264 456.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2452 01 63465465 63470255 Dod07g0598 07 7922293 7924928 PCT