Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0583 ATGGAGCAGTATGAGATTTTAGAACAGATTGGCAAGGGTTCCTTTGGTTCTGCTCTACTTGTTCAGCACAAGCATGAAAACAAAAAGTATGTACTCAAGAAGATCCGCCTTGCCCGCCAGACTGACAGAGCCCGTAGATCTGCCCATCAAGAGATGGAGCTTATTTCTAAAGTTCGAAATCCATTTATTGTGGAGTATAAAGATTCCTGGGTAGAAAAGGGTTGTTTTGTATGTATCATCATTGGCTATTGTGAAGGAGGAGATATGGCTGAAGCAATAAAAAAGGCTAATAGTGTTCATTTTTCTGAAGAGAAGCTATGTAAGTGGCTTGTTCAACTGCTGATGGCACTTGATTACTTGCATGCAAATCATATCCTGCACCGTGATGTCAAGTGTTCAAATATATTCTTGACAAAAGATCAAGATGTACGTGTAGGTGACTTTGGCCTTGCTAAAAGGTTGACGTGTGACGATCTTGCTTCCTCTGTTGTGGGGACTCCAAGTTATATGTGCCCAGAGCTTCTTGCTGATATACCTTATGGCTCTAAGTCAGATATCTGGTCTCTGGGATGCTGTGTATATGAAATGGCAGCTCATAAGCCAGCTTTTAGAGCTCTTGATATGCAAACATTGATTAATAAAATAAACAAGTCTTTAGTGGCACCGCTACCAACTATGTATTCTGGTCCATTTCGTGGGCTTGTCAAGAGCATGTTGCGGAAAAATCCAGAGCTTAGGCCAAGTGCTGCAGAATTATTAAATCATCCACATCTTCAACCTTATATTCTTAAAATTCATCAAAAACTCAATAGCCCCAGAAGAAGTACTTTTCCCTTCCAATGGCCTGAGTCAAATTACATGAGGAGAAATCAGTTTCTAGAGCCAGAATCTGTTTCTACGCTTTCTGACAGAGATAAACGATTTTCATTCAGCAATGACTGGGCCTTGAATCCTAGTATTTCCGGAACTGAAGTAGGTTCTCTGTGCTCTACTCAAAGAGCACAAGGATTCTTCACTTGTTCAAGAGAGAGACTGTATGATCTATCCGTTGGCTGTGTCCGTGAAGAATGCAATACAAACAAGTCAAAAACCACAAAGTTCTCAACTGGCTGTAGGACACCAAGATATATGGCAGCTAAGGAGTCTGCCACCCCCAGAAGGCAGATAATACCATCAAAGATATCACATATTGGTTCCAAGCGTGATTCGTTTCCAGCATCTCCAGCTGGTAAGTTTCCCCCACCAACTCGCAGAGCATCCCTTCCACTACCTACACCTACAAGAGCCATGGTCACAGCCACCACCCCTTATAGAGCAAATGTCGGTTTTCTCCAAAGTGTGGACTCGCCTGATATTTCTGTTAATGCACCACGGATTGACAAGATTGCAGAATTCCCTCTGGCCTCTTGTGATGATCATCATTTCTTCCCCGTCCACGGCACCTCATCAACATCTGCTCAATGCTCATCTAGCCCCCCCAGTAGTGCTGACTGCTCAATCACAAAGGACAAGTGTACAATCCAGGTTGTGGGCAAAACCAATGTCCCTACCAATGTCAACAATGATGTTTGTCCTGCTCCAGTACCAGTTTCACATGGCAGTGAATGCTCTGAGCCTGTGGCAACTGTTGTTTCTAGCCACTCCTCTGCCGAGTCTCGTCAGCGCAGGTTTGACACCTCGTCATACCAGCAACGTGCTGAGGCATTGGAGGGTTTGCTCGAGTTCAGTGCAAGGCTGCTACAACAACAGAGGTTTGATGAGCTTGGGGTGCTGTTGAAGCCATTTGGTCCTGAGAAGGTTTCTTCTAGGGAGACAGCTATTTGGTTGACCAAGAGCTTCAAAGAAACTGTGGCCTAA 1857 0.4421 MEQYEILEQIGKGSFGSALLVQHKHENKKYVLKKIRLARQTDRARRSAHQEMELISKVRNPFIVEYKDSWVEKGCFVCIIIGYCEGGDMAEAIKKANSVHFSEEKLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTKDQDVRVGDFGLAKRLTCDDLASSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMAAHKPAFRALDMQTLINKINKSLVAPLPTMYSGPFRGLVKSMLRKNPELRPSAAELLNHPHLQPYILKIHQKLNSPRRSTFPFQWPESNYMRRNQFLEPESVSTLSDRDKRFSFSNDWALNPSISGTEVGSLCSTQRAQGFFTCSRERLYDLSVGCVREECNTNKSKTTKFSTGCRTPRYMAAKESATPRRQIIPSKISHIGSKRDSFPASPAGKFPPPTRRASLPLPTPTRAMVTATTPYRANVGFLQSVDSPDISVNAPRIDKIAEFPLASCDDHHFFPVHGTSSTSAQCSSSPPSSADCSITKDKCTIQVVGKTNVPTNVNNDVCPAPVPVSHGSECSEPVATVVSSHSSAESRQRRFDTSSYQQRAEALEGLLEFSARLLQQQRFDELGVLLKPFGPEKVSSRETAIWLTKSFKETVA* 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0583 618 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Dod07g0583 618 CDD STKc_Nek 3 258 - -
Dod07g0583 618 Pfam Protein kinase domain 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g0583 618 SMART serkin_6 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g0583 618 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Dod07g0583 618 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
Dod07g0583 618 MobiDBLite consensus disorder prediction 400 423 - -
Dod07g0583 618 SUPERFAMILY Protein kinase-like (PK-like) 1 321 IPR011009 -
Dod07g0583 618 ProSiteProfiles Protein kinase domain profile. 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g0583 618 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 607 - -
Dod07g0583 618 Gene3D Transferase(Phosphotransferase) domain 1 86 310 - -
Dod07g0583 618 PANTHER SERINE/THREONINE-KINASE NEK4 1 607 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0583 Dod-Chr7 7661474 7667753 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0583 10 259 MAP Kinase Kinase Kinase AT1G53570 30.196 2.54e-36 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Dod07g0583 Pkinase 1.9e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0583 K08857 - gmx:100810347 999.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g0583 07 7661474 7667753 Dod07g0583 07 7661474 7667753 ECH