Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0564 ATGAGAGAGGGTTTGAGATCTAGGACTCGATTGAGGAATGGAAATGGTGGTGGTGATGGTGATGGGGTTGGTGATAAGGAAAGTGGTGGTGGTGGTGTGAAGAGTGAGGATTTTGATTTGGGTGGTGAGGGTTTAGGGGTTCAAGGCGAGGTGGCATTGGACTTGGAGAATGGGGAGAAGGATGAGGAGGTTGTTATAGTGAAGGAAGAATGTGAGTTGGATTTAGGTGTGAATACCAGAGGGAGGGAGGGTGCTGATGTTGACTTCGATGAGGATGTGAACAATGGGGGTTGTGAAGATGATAATGATGCTGTTGAGGGGAAAGCGAGGAAGGAGGAAGAAGGGTTGAATGAGACGGTGTTGGTTAGTGGTAGAGTGTTGCGGTCGAGGTCGAAGAGGGTGGATGAAGGAAAATCTTGTAGTGAAGGGAATGGTGTTGTTGTTACAGGGAGTACAGGCAGAGGGAGAGGTAGAGGTAGAGGCCGTGGCGGGTTTGGGAGGGTAGCAGTTAAAAAGGAACGTGAAGAAGATGACGAGTTTGTTCCTAAGGGTTATTGGGATGAGAGGGTTGGGCTGATGAGAAAAGGGAATACAAAGAGGAATTTGAAACGGAAGCGTGGGAGGCCTCCGAAAAAGCAGTTGGTAGAGCAAGATGAATTGGTTGAGCATTCGCCACGTAAGCGTGGTAGACCCCGCAAACAAAACGGTCTTCCGGCAGTGGCACATAATAGAGAAGGAAAAGGAGGCCTTCGAAAAGGTAAAAAACGGTCAAGTAGGAGAGATAATGCAAATGTGAATGCAGTTGATGATATGAGCTCAGGGAGATCTTCTGAGGGAGAGTTAGGAAAGAAGAGATTTTCTCCAGTCAAGAAGAATAAACCAGGGAAGGTTTTGAAAACTGAGGACAGTGGGGCGGCCTCACCTTTGAGATCAAATGCAGTCAATGATACGAGCTCAAGGAGATCTTCTGAGGGAGAGTTAGAAAAGAAGAGATTTTCTACAGTAAAGAAGAATAAACCAGGGAAGGTTTTGAAAACTGAGGATGGTGGGGTGGCCTCACCTTTGAGATCGAATATTGTGAACACTAATGTTTCAGAGAGAAGTGGAAAGAATAAAGAAAAGCAGTTAGTGAGGGAACAAATAATGGAACGGCTCTCAGCTGCTGGCTGGACAGTTGACTATAGACCTAGGAATGGAAAACCTTACAATGATTCTGTGTATGTTAGTCTAGATGGGAAGACACACTGGTCAATCACCTTGGCCTACAATAGGCTTAAAGCTCATTATGAAGCTGGTGATGGTGAAGGACTGGTATATGGGCCAGGCTTCAAATTTATACCAATACCAGAAGAGGATTTCAAAATACTGACCAAGGTAATGAACAAGAAAAGAAAAGATAAAGGGGCGCCAAAAGGGAGAAAGGGTGGAAAGATGGTAGATGGATTCAATAGAAAACTGAAAAAAGAAAAACCAGGTTCTCGTGCAGGCATGAGCAAGTCAGTGAAGGGGAAAATGAAAAGGAAATGGTCACTAGTTGAGGAGGCTGACTCAGATACGTCACCTAACAGAATGCCAGATCGGGTCAGGGGTCATAAGCGACACAAAACACAAAACAAGAAGCGATGTGCTCTGTTGGTTCGCAATGCTGAGGTGGTTATAGATTCAGAAGTTGATGGATATGTACCGTACAGTGGAAAACGAACTGTGCTTGCCTGGATGATTGATTTGGGAACAATTCTGCAAAATGGGAAGGTTCATTATATGCAACACAGAACAAAGAATGCATTACTGCATGGTAATATCACAGGAGATGGTATTCATTGTGGCTGCTGTGATCAAATCATAACAATTTCAGAATTTGAAGCTCATGCAGAAAGCAAAGTCTCTGATCCCCTAAAAAATATACACATAGAAGGAGGAACTTCTCTGTTGCAATGCCTGCTAGATTCGTGGAATAAACAAGACGAATCTGAACGTAAAGGTTTTCATTTTGTTGATGTTGCGGGTGAGGATCCGAATGATGACTCATGTGGTGTCTGTGGAGATGGCGGAGACCTGATATGTTGTGATGGTTGCCCATCAACATTCCATCAAAGCTGCTTGGATATAAATAATTTCCCATCTGGTGATTGGCATTGCATTTATTGTTGTTGCAAATTTTGTGGCTCAGTTGGTGGAAGTTCAAATCAAGGGGAGGAATATGATGATTTCTCTGTATCTACGTTGCTCACATGCGATTTGTGTGAGGAAAAATACCACAGATCCTGTGTTGAGGCAAATGATGGCACGCCTGATGAGTCTAGAGATGCCTGCTTTTGTGGAAACAGATGTCAAAAGTTATCAGAGAGACTCAAAATGCTTCTTGGGGTTAAACATGAAGTTGGAGATGGATTTTCTTTGACTTTTATCCGGCGATCAGATGTTGGCTGTGATGCTTCTCAAACAAAACCTCAGATAGTTGAATGTAATGCCAAGCTGGCTGTTGCGTTATCGGTAATGGATGAGTGCTTCATGCCATATATTGATCAGAGAAGCGGGATTAATCTGATCCATAGCATTCTATATAATAGTGGGTCGAACTTCAAACGTCTGAACTATAGTGGATTTGTTACTGCAATTCTGGCTAGAGGTGACGAGATCATCTGTGCTGCATCTATCAGGTTCCATGGGAATCAACTAGCAGAGATGCCATTTATTGGGACCCGGTATATGTACAGGCGAAAAGGAATGTGCCGCCGGCTTCTAAATGCCATTGAATGTGCACTCAGCTCTTTAAATGTTGAGTTATTGGTCATACCAGCTATCTCAGAACTCAGAGAAACTTGGACTTCTGTTTTTGGATTTGAGCCACTTGAATTGACAAGCAAGAAAATAATAAGGAACATGAGCCTGCTGGTATTCCCTCACGTAGATCTGTTGCAGAAAAAGATATCAAAGCATAAACTTTCTGAAGAAAATGTGATCCCTACAGAAGTTTCCAATCTTCAGAAGAATCATACAGAAGACAAGGTAGCAAATAATTGTGAAGAGGCAGGCTCCTTTGGATCTGATTTGATCAGTTGTACTGGTATCCCTTCCTCTAATGCAGACCAGATAAATGATAAAACCATGTCTGTTGAATGCCATGGTTGTCTTCCTGAGGGTTCATTGAATAACACACCTGAAATTACTAGCAGCACTGTACATCATCATAAATCTCCCAACGATGTCACATGCCAGGTTGTATTTCCTGAAAATTTGGCAGTGGAGGACAAAAGTACTGCAAATCCCCCTGATCATGTGAGTGATACTTGTGACCGAGCTAAAGACACAAGTACACATAATAATAGTAGTCATGATTGCATCATGCAGAACCATGATGAGAAGCCAGTAGATTTAGATGGTCAATTGAACAATTGCTGTATTACTCATGAGGAAAGGCAATTTCTTAAGGATGGTTGTGTTTCTGGTGAAGCAGTTCTTACAACCAATGCTTTGGTGCACCTTGAATCACAGAACATCACTGAAGATTTGGCTGTTAATCATGAAAAAAACTCCAGAGTGGTCAGTGCACCAAATGCTGATGAAGCAGAAGCATGTTCTGCTGAAACACTAAATCTCCAGACAAACATAAATGCTGAAGATGGCCAATCCATAGTTGTATCTTCAAGTTCCAGCGAAAAGATTGTGGATGGTGTCAATGAGAATAGTAAACCATCTGCTGTGGCTGAGGCAAATTTCCTTCCTGATACAGACATAATCGCCAAAAATGGGGACACGGTTCCTGAAAATGAGGATTGGATGAAGGGATGTCCGGAGCTGGCTGAGCCCGATTCACAGGTTGATGAAACTGCACGGAGCAAAGCTCCATCCTTGTGTACTCCAAACACAGGTGCTGGCATGGCTCTTCACTGTGCATCTGCTGGTGCTAGCAGTACTTCTTGTGGTAGTACTGAGGTGATAGTTCTGTCAAACCAAGCCAGTTGA 3966 0.4322 MREGLRSRTRLRNGNGGGDGDGVGDKESGGGGVKSEDFDLGGEGLGVQGEVALDLENGEKDEEVVIVKEECELDLGVNTRGREGADVDFDEDVNNGGCEDDNDAVEGKARKEEEGLNETVLVSGRVLRSRSKRVDEGKSCSEGNGVVVTGSTGRGRGRGRGRGGFGRVAVKKEREEDDEFVPKGYWDERVGLMRKGNTKRNLKRKRGRPPKKQLVEQDELVEHSPRKRGRPRKQNGLPAVAHNREGKGGLRKGKKRSSRRDNANVNAVDDMSSGRSSEGELGKKRFSPVKKNKPGKVLKTEDSGAASPLRSNAVNDTSSRRSSEGELEKKRFSTVKKNKPGKVLKTEDGGVASPLRSNIVNTNVSERSGKNKEKQLVREQIMERLSAAGWTVDYRPRNGKPYNDSVYVSLDGKTHWSITLAYNRLKAHYEAGDGEGLVYGPGFKFIPIPEEDFKILTKVMNKKRKDKGAPKGRKGGKMVDGFNRKLKKEKPGSRAGMSKSVKGKMKRKWSLVEEADSDTSPNRMPDRVRGHKRHKTQNKKRCALLVRNAEVVIDSEVDGYVPYSGKRTVLAWMIDLGTILQNGKVHYMQHRTKNALLHGNITGDGIHCGCCDQIITISEFEAHAESKVSDPLKNIHIEGGTSLLQCLLDSWNKQDESERKGFHFVDVAGEDPNDDSCGVCGDGGDLICCDGCPSTFHQSCLDINNFPSGDWHCIYCCCKFCGSVGGSSNQGEEYDDFSVSTLLTCDLCEEKYHRSCVEANDGTPDESRDACFCGNRCQKLSERLKMLLGVKHEVGDGFSLTFIRRSDVGCDASQTKPQIVECNAKLAVALSVMDECFMPYIDQRSGINLIHSILYNSGSNFKRLNYSGFVTAILARGDEIICAASIRFHGNQLAEMPFIGTRYMYRRKGMCRRLLNAIECALSSLNVELLVIPAISELRETWTSVFGFEPLELTSKKIIRNMSLLVFPHVDLLQKKISKHKLSEENVIPTEVSNLQKNHTEDKVANNCEEAGSFGSDLISCTGIPSSNADQINDKTMSVECHGCLPEGSLNNTPEITSSTVHHHKSPNDVTCQVVFPENLAVEDKSTANPPDHVSDTCDRAKDTSTHNNSSHDCIMQNHDEKPVDLDGQLNNCCITHEERQFLKDGCVSGEAVLTTNALVHLESQNITEDLAVNHEKNSRVVSAPNADEAEACSAETLNLQTNINAEDGQSIVVSSSSSEKIVDGVNENSKPSAVAEANFLPDTDIIAKNGDTVPENEDWMKGCPELAEPDSQVDETARSKAPSLCTPNTGAGMALHCASAGASSTSCGSTEVIVLSNQAS* 1322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0564 1321 MobiDBLite consensus disorder prediction 211 226 - -
Dod07g0564 1321 PANTHER PHD FINGER PROTEIN 12 90 1212 IPR042163 GO:0003714|GO:0045892
Dod07g0564 1321 PANTHER FINGER PROTEIN, PUTATIVE-RELATED 90 1212 - -
Dod07g0564 1321 CDD PHD1_AIRE 677 716 - -
Dod07g0564 1321 MobiDBLite consensus disorder prediction 132 350 - -
Dod07g0564 1321 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 666 735 IPR013083 -
Dod07g0564 1321 Pfam Tify domain binding domain 599 648 IPR032308 -
Dod07g0564 1321 ProSiteProfiles Zinc finger PHD-type profile. 674 719 IPR019787 -
Dod07g0564 1321 SMART PHD_3 718 778 IPR001965 -
Dod07g0564 1321 SMART PHD_3 676 717 IPR001965 -
Dod07g0564 1321 MobiDBLite consensus disorder prediction 321 344 - -
Dod07g0564 1321 MobiDBLite consensus disorder prediction 508 526 - -
Dod07g0564 1321 SUPERFAMILY FYVE/PHD zinc finger 669 721 IPR011011 -
Dod07g0564 1321 MobiDBLite consensus disorder prediction 508 536 - -
Dod07g0564 1321 MobiDBLite consensus disorder prediction 82 113 - -
Dod07g0564 1321 SMART AT_hook_2 203 215 IPR017956 GO:0003677
Dod07g0564 1321 SMART AT_hook_2 225 237 IPR017956 GO:0003677
Dod07g0564 1321 MobiDBLite consensus disorder prediction 305 320 - -
Dod07g0564 1321 MobiDBLite consensus disorder prediction 196 210 - -
Dod07g0564 1321 MobiDBLite consensus disorder prediction 1 44 - -
Dod07g0564 1321 MobiDBLite consensus disorder prediction 166 195 - -
Dod07g0564 1321 MobiDBLite consensus disorder prediction 1084 1115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0564 Dod-Chr7 7437526 7446506 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0564 187 1012 PHD Transcription Factor Family AT5G36670 38.062 0.0 574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0564 - - lang:109346644 1334.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g0564 07 7437526 7446506 Dod07g0564 07 7437526 7446506 ECH