Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0541 ATGGCACGGTTATCGAGGTCCTCCGCGCCGCGTCTTCTCTACACCCTATGCTCCTCCTCTCCGTCGTCTCTGGCCTCCCTCCTCGGCGGAGCTCGGCACTTGTCGTCGGCGGGAGGGAGCGCGGCGCGCGCGAGGGCGGCGGCGGAGGACAAGGAGCCGTGGTGGAAGGAGTCGATGGAGCGGCTTCGGAACATTGGGATCTCAGCGCACATAGATTCCGGGAAGACGACGCTGACGGAGCGGGTGTTGTTCTACACTGGCCGGATCCACGAGATCCACGAGGTGAGGGGAAGGGACGGCGTCGGCGCCAAGATGGACTCCATGGACTTGGAGAGGGAGAAAGGGATCACTATCCAGTCTGCTGCCACTTACTGCACTTGGAAAGACTACAAGATTAACATAATTGATACACCCGGTCATGTTGATTTCACCATTGAGGTTGAGAGGGCTTTGCGTGTCCTTGATGGTGCCATTCTTGTACTTTGTAGTGTTGGTGGGGTGCAAAGTCAGTCCATTACTGTAGATCGACAAATGAGAAGATATGAGGTTCCAAGACTTGCATTTATCAACAAGCTTGATCGGATGGGAGCTGATCCATGGAAAGTTTTAAATCAGGCAAGATCTAAGCTTCGGCATCACAGTGCTGCAGTGCAAGTTCCAATAGGCTTGGAGGATGATTTTAAGGGACTTGTTGATCTTGTCCAGTTAAAAGCCTACTATTTTCATGGTTCAAATGGTGAAAAAGTTGTCACTGAAGAAGTTCCCGCAAATGTGGAAGCCCTGGTAGCAGAAAAAAGGCGTGAACTCATAGAAACTGTATCAGAGGTTGACGATAAACTTGCTGAAGCTTTTCTCAGTGATGAGCCCATATCACCTGCTGATCTTGAGGAAGCAGTTCGAAGGGCCACGATATCAAGGAAATTTGTACCCGTATTCATGGGTAGTGCTTTCAAAAATAAGGGGGTACAGCCACTTCTGGATGGTGTAATTAATTATTTGCCATGTCCAATTGAAGTTAGTAATTATGCCCTTGACCAAACTAAGAATGAGGAGAAGGTTGAGTTGCTTGGAAGTCCTGATGGGCCACTGGTGGCATTGGCTTTCAAGTTGGAGGAAGGGCGGTTTGGTCAGTTAACATATCTAAGAATCTACGAGGGTGTCATTAAGAGGGGTGAGTTTATTGTTAATGTGAACACTGGCAAGAAGATCAAGGTTCCTCGCTTGGTTCGGATGCATTCTGACGAGATGGAGGACATCCAACAGGCTCATGCTGGGCAAATAGTTGCTGTATTTGGTGTTGATTGTGCATCAGGAGATACCTTTACTGATGGGTCAGTTAGATACACAATGACTTCTATGAATGTTCCTGAGCCAGTGATGTCGTTAGCTGTACAGCCAGTTTCAAAAGATTCTGGAGGGCAATTTTCAAAAGCTTTGAATCGCTTCCAAAAGGAGGATCCCACATTCCGTGTTGGTTTAGACCCAGAGAGCGGGCAGACTATCATTTCTGGAATGGGGGAACTGCATTTAGATATCTATGTTGAACGTATTAGGAGAGAGTATAAGGTTGATGCTGCTGTTGGAAAGCCCCGCGTAAACTTCAGAGAAACTGTTACACAACGTGCTGATTTTGATTATTTACATAAGAAGCAATCTGGAGGGCAAGGTCAATATGGACGAGTTATTGGGTATATTGAACCGCTTCCTGCAGGATCGCCAACTAAGTTTGAATTTGAAAACCTGCTTGTTGGGCAAGCTATTCCATCAAATTTTATCCCTGCAATTGAGAAGGGTTTCAAAGAAGCCGCCAACTCGGGTGCTTTAATTGGACATCCTGTTGAAAATCTGAGAGTTGTCTTGACTGATGGTGCTGCCCATGCTGTTGATTCTAGTGAACTTGCATTTAAGTTGGCTTCTATATATGCTTTTAGACAGTGCTATGCGGCTTCCAGACCAGTTATATTAGAACCAGTTATGCTCGTTGAGCTGAAAGTGCCAACAGAATTTCAGGGAGCCGTTGCTGGTGACATCAACAAGAGAAAAGGGGTGATTGTTGGCAATGATCAGGAAGGAGATGACTCTATCATCACTGCCCATGTCCCTCTTAACAATATGTTTGGGTACTCTACAGCTCTTCGTTCAATGACACAGGGAAAAGGTGAGTTCACTATGGAATACAAGGAACATTCACCAGTTTCTCATGATGTACAGATGCAATTAATAAACGCGTACAAGGGCAATAAGGCAGCTGAA 2253 0.4652 MARLSRSSAPRLLYTLCSSSPSSLASLLGGARHLSSAGGSAARARAAAEDKEPWWKESMERLRNIGISAHIDSGKTTLTERVLFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATYCTWKDYKINIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKVLNQARSKLRHHSAAVQVPIGLEDDFKGLVDLVQLKAYYFHGSNGEKVVTEEVPANVEALVAEKRRELIETVSEVDDKLAEAFLSDEPISPADLEEAVRRATISRKFVPVFMGSAFKNKGVQPLLDGVINYLPCPIEVSNYALDQTKNEEKVELLGSPDGPLVALAFKLEEGRFGQLTYLRIYEGVIKRGEFIVNVNTGKKIKVPRLVRMHSDEMEDIQQAHAGQIVAVFGVDCASGDTFTDGSVRYTMTSMNVPEPVMSLAVQPVSKDSGGQFSKALNRFQKEDPTFRVGLDPESGQTIISGMGELHLDIYVERIRREYKVDAAVGKPRVNFRETVTQRADFDYLHKKQSGGQGQYGRVIGYIEPLPAGSPTKFEFENLLVGQAIPSNFIPAIEKGFKEAANSGALIGHPVENLRVVLTDGAAHAVDSSELAFKLASIYAFRQCYAASRPVILEPVMLVELKVPTEFQGAVAGDINKRKGVIVGNDQEGDDSIITAHVPLNNMFGYSTALRSMTQGKGEFTMEYKEHSPVSHDVQMQLINAYKGNKAAE 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0541 751 Pfam Elongation Factor G, domain III 455 529 IPR041095 -
Dod07g0541 751 PANTHER ELONGATION FACTOR G, MITOCHONDRIAL 1 751 IPR045044 -
Dod07g0541 751 Gene3D Elongation Factor G (Translational Gtpase), domain 3 462 535 - -
Dod07g0541 751 SMART EFG_C_a 653 740 IPR000640 -
Dod07g0541 751 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 60 337 IPR000795 GO:0003924|GO:0005525
Dod07g0541 751 SUPERFAMILY EF-G C-terminal domain-like 653 745 IPR035647 -
Dod07g0541 751 Hamap Elongation factor G [fusA]. 58 744 IPR004540 GO:0003746|GO:0005525|GO:0006414
Dod07g0541 751 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 106 121 IPR031157 -
Dod07g0541 751 CDD mtEFG1_II_like 363 443 - -
Dod07g0541 751 SMART EFG_IV_2 531 651 IPR005517 GO:0005525
Dod07g0541 751 PANTHER ELONGATION FACTOR G, MITOCHONDRIAL 1 751 - -
Dod07g0541 751 Pfam Elongation factor G C-terminus 654 739 IPR000640 -
Dod07g0541 751 CDD EF-G 64 336 - -
Dod07g0541 751 Gene3D - 657 727 - -
Dod07g0541 751 SUPERFAMILY Ribosomal protein S5 domain 2-like 530 652 IPR020568 -
Dod07g0541 751 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 59 334 IPR027417 -
Dod07g0541 751 Pfam Elongation factor Tu GTP binding domain 61 334 IPR000795 GO:0003924|GO:0005525
Dod07g0541 751 Gene3D Translation factors 344 461 - -
Dod07g0541 751 Pfam Elongation factor G, domain IV 530 650 IPR005517 GO:0005525
Dod07g0541 751 TIGRFAM small_GTP: small GTP-binding protein domain 62 234 IPR005225 GO:0005525
Dod07g0541 751 SUPERFAMILY EF-G C-terminal domain-like 453 530 IPR035647 -
Dod07g0541 751 Gene3D - 55 340 IPR027417 -
Dod07g0541 751 CDD mtEFG1_C 656 733 IPR035649 -
Dod07g0541 751 CDD EFG_mtEFG1_IV 534 649 IPR005517 GO:0005525
Dod07g0541 751 Gene3D - 536 741 IPR014721 -
Dod07g0541 751 CDD EFG_III 456 531 IPR009022 -
Dod07g0541 751 TIGRFAM EF-G: translation elongation factor G 58 745 IPR004540 GO:0003746|GO:0005525|GO:0006414
Dod07g0541 751 PRINTS GTP-binding elongation factor signature 133 143 IPR000795 GO:0003924|GO:0005525
Dod07g0541 751 PRINTS GTP-binding elongation factor signature 113 121 IPR000795 GO:0003924|GO:0005525
Dod07g0541 751 PRINTS GTP-binding elongation factor signature 64 77 IPR000795 GO:0003924|GO:0005525
Dod07g0541 751 PRINTS GTP-binding elongation factor signature 185 194 IPR000795 GO:0003924|GO:0005525
Dod07g0541 751 PRINTS GTP-binding elongation factor signature 149 160 IPR000795 GO:0003924|GO:0005525
Dod07g0541 751 Pfam Elongation factor Tu domain 2 376 442 IPR004161 GO:0005525
Dod07g0541 751 SUPERFAMILY Translation proteins 301 453 IPR009000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0541 Dod-Chr7 7190918 7200823 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0541 378 538 Eukaryotic Initiation Factors Gene Family AT3G22980 23.596 1.92e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0541 K02355 - gmx:100783315 1367.83