Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0501 ATGTCCCTCTTCCTCCTCTTGTTCCTTCTCCCCTTGTCCCTCCTTCCACTTTCCCTCCAACAACAACCACCACCACCACCCTCTTCCTCCTCCTCTTGTCCCCTCAACTTCACCATCCTCCACTCCCTCACCCCTTTTGGCTCCACACCTTCCTCCTTCGCCCCCGGCACTCACTGCCAGTTCATCCGCCAGTCCTACCGCCTCCTCCAGTCAGACTACCTCCTCCGCACCAACCTCTTCCTCCCTCCCCTCAACTCCTCCCTCTCCTGCTGGTCCCTCTTCCAATCTTACATCAACACCTTCGACCCTTCCTTCAACATCCAATCCTCTTGTGGCTTCTCCACCTCCTCCATCTCCCAAGGTTGCACCAACATCACCACAAGGCAACAGTTTGAAGCTCTTGTCCCTCCCTCAGTTTTTCAGTCTGTGGACAAGAATTGCAACCAGTCACTTGAGAACAACTCACCTTGTGCACTTTGCACCACTAGCTTGTCTTCCTTGCCAGCTTCTGGCCCTTCTGTTGGAAACCTCACTGACTGCACTGGCTACCCTTCTGTCTATGCTGCTGCTTTTTGCAACATGTTTGGCCCTTCTGACCCTGGCACTGCCAAGTGCTTGTTCCAGCTTGATTTCACACCCTTGGGGTCAAAGGGTGGTGGGAATAAGAAGGTTGGTGTTGTTGTGGTTGTTTCTGTTGTTTGTGTGCTTGGTTTGGTGTGCTTGGTTTTGGGGTTGTGGGGTTGTTGGAGGTTGAGTGAGAAGATAGGTGGGAAGAATGTTAGTGTTGCTGAGATGGGTTTGATGTCTTTTGTTGGTCGTGTTGGAGGGTTGGATTCTATGGATCAGAGTACTACTTTGATTAGGTTCAGTATTGAAGATATCAAGAAGGCTACTAAGAATTTCTCTAGGGAGAATATAATTGGGAGAGGGGGTTATGGGAATGTGTATAAAGGTTTCCTCTCTGATGGGACTGAGGTTGCATTGAAGAGGTTCAAGAATTGTTCTTCTGCTGGTGATGCTAGCTTCAAGCATGAGGTTGAGGTGATTGCTAGTGTTAGGCATGTGAACCTTGTGGCCTTGAGAGGGTATTGCAGTGCCACAACTCACTTGGAAGGTTACCAGAGGATTATTGTTTGTGATTTGATGGAGAATGGGAGCCTCCATGATCATTTGTTCGGTTCTATGGGGGTGAAGCTTAGTTGGCCAATTAGGCAGCATATTGCTTTAGGCACTGCTAGGGGATTGGCTTATTTGCATTATGGGGCACAACCTGCTATAATTCATAGGGATATTAAAGCAAGTAACATACTTCTTGATGAGAAGTTTGAGGCTAAGGTAGGTGACTTTGGGCTAGCAAAGTTCAACCCTGAGGGGATGACACATATGAGCACAAGGGTGGCCGGAACTATGGGCTATGTTGCTCCTGAGTATGCATTGTACGGACAACTGACTGAGAGAAGCGATGTTTTCAGCTATGGTGTTGTGCTTCTTGAGCTTTTGAGTGGGAGGAAGGCCCTTCAAATGAACAATGATGGACAACCTTCTGCTTTGACTGATTGGGCTTGGTCATTGGTTAGGACAGGTAAAGCCTTGGATGTTATTGAAGATGGTATGCCAGAACCTGATTCACCACAAGTTCTTGAGAAGTATGTGTTAATTGCTGTGGTTTGCTCTCATCCACAGTTATATGCTAGGCCTACAATGGATCAGGTTGTTAAAATGATGGAGACAGATGAGTCAATACCTTCGATTCCGGACCGGCCGATCCCTCTTGTTGCCGGCAGGCTCGATATTGAGAGATCCGTGAGCAGCAGCGGCTCCGGCCAGCTCTCTAGTCCAACAGGTTATCAATCATATGTAATTGGAAGTGATCACCATTCTTCTAATAATTCTAAGGAAGAAAGAAGCTCAAGCTCCAGGATTTTGAGTACAGATTGA 1938 0.4778 MSLFLLLFLLPLSLLPLSLQQQPPPPPSSSSSCPLNFTILHSLTPFGSTPSSFAPGTHCQFIRQSYRLLQSDYLLRTNLFLPPLNSSLSCWSLFQSYINTFDPSFNIQSSCGFSTSSISQGCTNITTRQQFEALVPPSVFQSVDKNCNQSLENNSPCALCTTSLSSLPASGPSVGNLTDCTGYPSVYAAAFCNMFGPSDPGTAKCLFQLDFTPLGSKGGGNKKVGVVVVVSVVCVLGLVCLVLGLWGCWRLSEKIGGKNVSVAEMGLMSFVGRVGGLDSMDQSTTLIRFSIEDIKKATKNFSRENIIGRGGYGNVYKGFLSDGTEVALKRFKNCSSAGDASFKHEVEVIASVRHVNLVALRGYCSATTHLEGYQRIIVCDLMENGSLHDHLFGSMGVKLSWPIRQHIALGTARGLAYLHYGAQPAIIHRDIKASNILLDEKFEAKVGDFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTERSDVFSYGVVLLELLSGRKALQMNNDGQPSALTDWAWSLVRTGKALDVIEDGMPEPDSPQVLEKYVLIAVVCSHPQLYARPTMDQVVKMMETDESIPSIPDRPIPLVAGRLDIERSVSSSGSGQLSSPTGYQSYVIGSDHHSSNNSKEERSSSSRILSTD* 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0501 645 Gene3D Transferase(Phosphotransferase) domain 1 382 583 - -
Dod07g0501 645 SMART serkin_6 301 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g0501 645 ProSiteProfiles Protein kinase domain profile. 301 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g0501 645 MobiDBLite consensus disorder prediction 602 626 - -
Dod07g0501 645 CDD STKc_IRAK 307 576 - -
Dod07g0501 645 ProSitePatterns Protein kinases ATP-binding region signature. 307 329 IPR017441 GO:0005524
Dod07g0501 645 PANTHER OS01G0253100 PROTEIN 26 628 IPR045271 GO:0004714|GO:0006468
Dod07g0501 645 Pfam Protein kinase domain 302 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod07g0501 645 PANTHER RECEPTOR-LIKE KINASE IN IN FLOWERS PROTEIN 26 628 - -
Dod07g0501 645 ProSitePatterns Serine/Threonine protein kinases active-site signature. 426 438 IPR008271 GO:0004672|GO:0006468
Dod07g0501 645 Gene3D Phosphorylase Kinase; domain 1 276 380 - -
Dod07g0501 645 Pfam SPARK 28 167 IPR043891 -
Dod07g0501 645 MobiDBLite consensus disorder prediction 602 645 - -
Dod07g0501 645 SUPERFAMILY Protein kinase-like (PK-like) 283 583 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0501 Dod-Chr7 6580584 6582794 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0501 28 631 Receptor kinase-like Gene Family AT2G48010 62.007 0.0 748
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Dod07g0501 Pkinase 2.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0501 - - gmx:100800760 875.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g0501 07 6580584 6582794 Dod07g0501 07 6580584 6582794 ECH
Dod01g2372 01 62315184 62316110 Dod07g0501 07 6580584 6582794 ECH
Dod01g2372 01 62315184 62316110 Dod07g0501 07 6580584 6582794 PCT