Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0456 ATGCTAATGGATATGAATTATTTTCGTGAAACAGATCCTAATGCAGAAGTTATTGCTCTATCACCAACCACATTAATGGCAAAAAATAGATTCGTCTGTGAGATCTGCAACAAAGGCTTTCAAAGGGACCAAAACCTTCAGTTGCATAGGAGAGGTCACAATCTTCCATGGAAACTGAGGCAAAGGGCAACCACTGAGGTGAAGAAGAGGGTGTACGTGTGCCCTGAGCCATCATGTGTGCACCATAACCCAGCTCGTGCATTAGGAGACCTCACTGGGATAAAGAAACACTACAGCAGGAAACATGGTGAGAAGAAGTGGAAATGTGACAAGTGCTCTAAAAGATATGCAGTCCAATCTGATTGGAAGGCCCACCAGAAAACTTGTGGGACCAGGGAATACAAATGTGATTGTGGAACCATATTTTCCAGGAGGGACAGTTTCATCACTCACAGAGCCTTTTGTGATGCATTAACTGAGGAAAACAACCAAGTGAACCAACAAGGATTAACAAATGGCATGCCACAAAACTTGCAAAATGATCAAGTGCCTGATCTTATGTCCACAATGCCCCTAAGCACTAGTTCAAACACTGCATCTGATCAACTCAACAACAACAACAACTATGACCCCAATAAGAATAACCCACTTAGAATACTCTCCCAAGAGCTTGCCCCTTCAATGCCATTCAAGTCCATGGGCAATATCATGGGTGTGGGCATGTTCTCCACAAAAAGCTCAGGTACACTTTTTGGTGGTCCAAAAACAATGCTTCCCTTTTCAAGCCTTCAACTCAGCTCCAACAACTCCTCTGGTTTCAATTACTTCCAACAAGACAGCAAGAACTTAGACCTAATTTCTGGCTCAGCTCACATGTCTGCAACAGCTTTACTGCAAAAAGCAGCACAAATGGGAGCCACTGCAAGCAACAATAGCATTAACTCGCCCATGATGCAGAAAAGCTTTGTTACTTCCATGGCTGGTCCTGACCAGGTATCTTCCCCTAGACCACCATATAACCCCTCCTATGACCATTTCCATGCACAACCTGATCCATCACACATGGCTTTCACAAACCAATTCTTTCATAAAGGGCAACAAGAAATGCCACTGACATTTGATGCTAATAACACTAGTACTAATAATGGGCCAACAATGAATGATCAAATGGGAATGTTTAGCACAATGTTCATGGGAAGTGACCACAACAGCACAGGATTGATGAACAATAATGTGGAGCAAGTGGTTGGTACTAGTACTAGTTCTAGTTTGGTCCATGGAAGAGACCTTGCAGAAGGGAATAACCCAATGGGGGCAGTACCAAGGTTTGGAGGGAGTGATCACATGACAACAGTTCATGATTTCTTGGGAATAGGGTCAACTTCTTCAAGGGGTGGAAGTGGTTTACATGAGCCACTGAAACATCATCAGCAACAAAGATTGGAGTTAGAATCATTGAGCCACCAGAGGTTACCAATGATCAATCACTTTCACCATCACCTTCAACATGGAGAATCAGCTATGGAGAAATCTATTTGGGACATTTGA 1548 0.4315 MLMDMNYFRETDPNAEVIALSPTTLMAKNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRATTEVKKRVYVCPEPSCVHHNPARALGDLTGIKKHYSRKHGEKKWKCDKCSKRYAVQSDWKAHQKTCGTREYKCDCGTIFSRRDSFITHRAFCDALTEENNQVNQQGLTNGMPQNLQNDQVPDLMSTMPLSTSSNTASDQLNNNNNYDPNKNNPLRILSQELAPSMPFKSMGNIMGVGMFSTKSSGTLFGGPKTMLPFSSLQLSSNNSSGFNYFQQDSKNLDLISGSAHMSATALLQKAAQMGATASNNSINSPMMQKSFVTSMAGPDQVSSPRPPYNPSYDHFHAQPDPSHMAFTNQFFHKGQQEMPLTFDANNTSTNNGPTMNDQMGMFSTMFMGSDHNSTGLMNNNVEQVVGTSTSSSLVHGRDLAEGNNPMGAVPRFGGSDHMTTVHDFLGIGSTSSRGGSGLHEPLKHHQQQRLELESLSHQRLPMINHFHHHLQHGESAMEKSIWDI* 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0456 515 Gene3D Classic Zinc Finger 86 166 - -
Dod07g0456 515 SMART c2h2final6 72 102 IPR013087 -
Dod07g0456 515 SMART c2h2final6 107 127 IPR013087 -
Dod07g0456 515 SMART c2h2final6 31 53 IPR013087 -
Dod07g0456 515 ProSiteProfiles Zinc finger C2H2 type domain profile. 31 53 IPR013087 -
Dod07g0456 515 PANTHER PROTEIN INDETERMINATE-DOMAIN 2-LIKE 10 486 - -
Dod07g0456 515 Gene3D Classic Zinc Finger 10 76 - -
Dod07g0456 515 SUPERFAMILY beta-beta-alpha zinc fingers 30 128 IPR036236 -
Dod07g0456 515 MobiDBLite consensus disorder prediction 190 211 - -
Dod07g0456 515 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 10 486 - -
Dod07g0456 515 Pfam Zinc finger, C2H2 type 31 53 IPR013087 -
Dod07g0456 515 ProSitePatterns Zinc finger C2H2 type domain signature. 33 53 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0456 Dod-Chr7 6051467 6054847 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0456 12 313 IDZ Gene Family AT3G50700 54.088 4.28e-105 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Dod07g0456 zf-C2H2 0.0052 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0456 - - ahf:112730641 703.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g0456 07 6051467 6054847 Dod07g0456 07 6051467 6054847 ECH