Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0441 ATGGTTGAAACGAGGCGCAGCTCTTCCTCCTCGAAGCGCAGCCTCTCTTCCCCTTCTCCTTCCAACCTCAACAAACGCTCCAAGGTTTCCACCGCAGAGGATGCTTCGTCCACGACGATTCCGGTTGCTACTCCTCCTCCGGTCAACGAATCTGGTCCCGGAAACGATGATCTGCCCGAAACGGCGTCGTTGAAGCCCGTCGTAGATGAGGTTTGCGGTGATGACGCCAGTTTGCCTGAAACGGCGTCGTTTAAGACCCCTCCTCCTCCTCCTCCTTCTGTTCCGGCAGCGGAAGGGGACGATTTGGTCACCCCTGAGTGCGCAGGTGAGGCTGCTGTGGATGGGGAGAAATCAAAGGGGGCTGTTGCGACTGGCCGATCGAAGAAACGGCCAGCAAAGACGACAGTGGCGGCGACAGCGGCGAAATTGGGGCCGAAGGCTGCGTGGGGAAAGCTGCTTTCTCAATGTTCTCCGAATCCTCACCTGCCCCTGTGTGATTCTATCTTCACCATTGGGCAAGCCCGTCATTCTAATCTATGGCTTAGAGATCCCTCTGTTGGTCATTGTTTGTGCAAGCTGAGACAAATAGAGCGTGGAGGTTCATCTGTTGCATTGCTTGAAGTTACTGGGGGTAAAGGTTCTGTTCAAGTTAATGGTAAAATCCATAGAAAGAATGCACGCCTAATTTTAAGTGGAGGTGATGAGGTGGTCTTCGGCTCTTCTGGCAAACATGCTTATATCTTTCAGCAGCTCACTAATGGTAGTGTTACCACTACTGGCATACCTTCTTCTGTTAGTATTTTAGAAGCCCAGAGTTCCCCAGTGAATGGAATTCAAGTTGAAGCTAGATCTGGGGACCCTTCTGCTGTTGCTGGAGCATCAATATTGGCGTCATTATCAAATCTTCATAAAGATTTATCTCTCCTTCCGCCTGCTGCTAAAGCTGGCAAGAATGCCCAACAAAATGTGGATGTTTCATCGCTACCTTCTGGCCATGGGGATGGTATTCGAGACGATGAAATGAAGGATACAAACAATACTGATGAACCGACTGGAGCTGTTTCTGCTGAGAAAACTGTTCTCGCATCCTCTACCACTGTCAAGGAAAATCCTAGCATTGACACCATGGAGGTTGATGCTAATGTGGATGCTGATGTTGGGAAGATGAATGCTACTGCCCATGAATTAAGGCCGTTACTGAGCATGCTTGCTGGTTCATATCCTGATTTTGATTTAAGTGGTAGTAGCATTTCAAAGATACTGGAAGAGCGAAAGGAGTTAAGAGAACTTCTTAAAGATGTTGATACCCCTACAATATTGGCATCAACCAGGAGGCAAGCTTTTAAGGAGAGTTTACAACAAAGAATTCTCAATCCTGACAATATTGATGTCTCATTTGAAACTTTCCCATACTATCTCAGTGATACAACCAAGAATGTTTTGATTGCTTCTACACACATTCATTTGAAGTGTAATGGTTTTGGAAAATACGCCTCAGACCTTCCATCAGTGTCCCCGCGAATATTGTTATCTGGACCTGCAGGTTCGGAAATATATCAGGAGACTTTGTCCAAGGCGCTTGCTAAGCATTTTGGTGCCAAGCTACTGATTGTGGATTCTCTTTCATTGCCTGGTGGATCACCATCAAAGGAAGTTGATTCTTCAAAAGAAAGTTCAAAGCTTGAAAGGCCATCTGTCTTTGCTAAGAGAAGTACACAGGCTGCCTCATTACATCACAAGAAACCAACTTCTAGTGTTGATGCTGAAATTGTAGGTGGGTCCACAATAAGTTCTCAGGCTATGCTGAAGCAAGAGGTTTCTACTGCATCATCAAAAGGCACTACTCTTAAAACAGGTGATCGGGTAAAATTTGTTGGTAACTTCCCTTCTGCTGTTTCATCGCTGCAAAATTATCCGTCAAGGGGACCAAGCTATGGCTCTCGGGGCAAAGTTCTTCTTCCATTTGAAGATAATGGATCTTCAAAAATTGGGGTTAGGTTTGATAAATCAATTCCTGGTGGCAATGATCTTGGAGGCCTTTGTGAAGATGATCGTGGATTCTTTTGTTCTGCAAATCATTTACTGCGAGTAGATGGTTCTGGGGGGGATGACATTGACAAGATTGCAATTAATGAAATCTTTGAGGTTGTCTCCAATCAGAGTAAAAATGGTGCAGTAGTGTTATTCATTAAAGATATAGAGAAGTCGATGGTTGGGAACTCTGAAGTTTTGAAAAGTAAATTTGAAAACTTGCCACAGAATGTTGTTGTAATTGGCTCACATGCCCAGCTGGACAATCGTAAGGAGAAGATGCAACCTGGTGGCCTTCTGTTTACGAAGTTTGGGAGCAATCAGACAGCACTACTAGATCTTGCTTTTCCGGATAACTTTGGTAGAATGCATGATAGGAGCAAAGAAACCCCCAAAGTAATGAAGCAACTTAGCCGCCTTTTCCCAAACAGGGTAACAATACAGATGCCTCAGGATGAGGCCTTACTTTCTGATTGGAAGCAGCAGTTAGAACGTGATGTTGAAACTATGAAAGCTCAGTCCAATGTCGTCGGCATTCGCTCAGTTCTCAGCAAAGTTGGATTGGAATGTCCTGAGCTTGAGACTGTCAGCATCAAAGATCAAGCCTTAACAACTGAAAGTGTGGAAAAGACCATTGGTTGGGCTATAAGTTATCATCTTATGCACTCGTCTGAGGCTCCTAACAAAGATTCTAAGCTTGTGTTGTCTGCAGAAAGCATTAAGTATGGGCTGAACATTCTACAGGGCATTCAAAATGAAAACAAGAGCTCGAAGAAATCACTGAAGGATGTGGTTACTGAGAATGAGTTTGAGAAAAAATTGCTTGGTGATGTTATTCCGCCAACTGATATTGGGGTCACATTTGATGATATTGGTGCTTTAGAAAATGTGAAGGACACCTTGAAGGAATTGGTCATGCTTCCTCTTCAGAGGCCTGAATTGTTTTGCAAAGGACAGCTGACTAAGCCTTGCAAGGGAATATTGCTTTTTGGCCCTCCTGGCACGGGAAAAACAATGCTTGCAAAGGCTGTGGCAACTGAGGCAGGAGCAAATTTTATCAATATTTCAATGTCCAGCATTACTTCAAAGTGGTTTGGTGAAGGAGAAAAATATGTCAAAGCAGTCTTTTCTCTTGCAAGCAAAATCGCTCCAAGTGTTATTTTTGTTGATGAGGTTGATAGCATGTTAGGGAGACGTGAAAATCCTGGTGAGCATGAGGCAATGCGTAAAATGAAGAATGAGTTTATGGTCAATTGGGATGGTTTGCGTACAAAAGATAAAGAGCGCGTACTTGTTCTTGCTGCTACAAACAGGCCTTTTGATCTTGATGAAGCTGTTATTAGGAGGCTTCCGCGAAGATTGATGGTTAATTTGCCAGATGCTCCAAACAGAGAGAAAATTCTCAAAGTCATCATAGCAAAGGAAGATTTGGCGCCTGATGTTGATTTGGAAGCATTGGCAAATATGACTGATGGATATTCAGGGAGTGATCTGAAGAATCTGTGTGTCACAGCAGCTCACTGCCCAATAAGGGAGATCTTGGAGAAGGAAAAGAAGGAGAGAAGTTTAGCATTGGCGGAGAACAAACCTGTACCTCGATTGTGTAGCAGTGCTGACATTCGGCCCTTAAAGATGGAGGATTTTAAATATGCACATGAGCAGGTGTGTGCAAGTGTATCATCGGAGTCAAATAATATGAACGAGCTACTCCAATGGAATGATCTTTATGGAGAAGGCGGATCAAGAAAAATGAGATCACTGAGCTATTTCATGTAA 3807 0.4405 MVETRRSSSSSKRSLSSPSPSNLNKRSKVSTAEDASSTTIPVATPPPVNESGPGNDDLPETASLKPVVDEVCGDDASLPETASFKTPPPPPPSVPAAEGDDLVTPECAGEAAVDGEKSKGAVATGRSKKRPAKTTVAATAAKLGPKAAWGKLLSQCSPNPHLPLCDSIFTIGQARHSNLWLRDPSVGHCLCKLRQIERGGSSVALLEVTGGKGSVQVNGKIHRKNARLILSGGDEVVFGSSGKHAYIFQQLTNGSVTTTGIPSSVSILEAQSSPVNGIQVEARSGDPSAVAGASILASLSNLHKDLSLLPPAAKAGKNAQQNVDVSSLPSGHGDGIRDDEMKDTNNTDEPTGAVSAEKTVLASSTTVKENPSIDTMEVDANVDADVGKMNATAHELRPLLSMLAGSYPDFDLSGSSISKILEERKELRELLKDVDTPTILASTRRQAFKESLQQRILNPDNIDVSFETFPYYLSDTTKNVLIASTHIHLKCNGFGKYASDLPSVSPRILLSGPAGSEIYQETLSKALAKHFGAKLLIVDSLSLPGGSPSKEVDSSKESSKLERPSVFAKRSTQAASLHHKKPTSSVDAEIVGGSTISSQAMLKQEVSTASSKGTTLKTGDRVKFVGNFPSAVSSLQNYPSRGPSYGSRGKVLLPFEDNGSSKIGVRFDKSIPGGNDLGGLCEDDRGFFCSANHLLRVDGSGGDDIDKIAINEIFEVVSNQSKNGAVVLFIKDIEKSMVGNSEVLKSKFENLPQNVVVIGSHAQLDNRKEKMQPGGLLFTKFGSNQTALLDLAFPDNFGRMHDRSKETPKVMKQLSRLFPNRVTIQMPQDEALLSDWKQQLERDVETMKAQSNVVGIRSVLSKVGLECPELETVSIKDQALTTESVEKTIGWAISYHLMHSSEAPNKDSKLVLSAESIKYGLNILQGIQNENKSSKKSLKDVVTENEFEKKLLGDVIPPTDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNREKILKVIIAKEDLAPDVDLEALANMTDGYSGSDLKNLCVTAAHCPIREILEKEKKERSLALAENKPVPRLCSSADIRPLKMEDFKYAHEQVCASVSSESNNMNELLQWNDLYGEGGSRKMRSLSYFM* 1269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0441 1268 MobiDBLite consensus disorder prediction 565 580 - -
Dod07g0441 1268 CDD AAA 1002 1135 - -
Dod07g0441 1268 MobiDBLite consensus disorder prediction 1 133 - -
Dod07g0441 1268 MobiDBLite consensus disorder prediction 546 587 - -
Dod07g0441 1268 SMART AAA_5 1000 1137 IPR003593 -
Dod07g0441 1268 Pfam ATPase family associated with various cellular activities (AAA) 1004 1133 IPR003959 GO:0005524|GO:0016887
Dod07g0441 1268 ProSitePatterns AAA-protein family signature. 1107 1126 IPR003960 GO:0005524|GO:0016887
Dod07g0441 1268 Gene3D - 1136 1230 - -
Dod07g0441 1268 MobiDBLite consensus disorder prediction 314 367 - -
Dod07g0441 1268 MobiDBLite consensus disorder prediction 1 45 - -
Dod07g0441 1268 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 1268 - -
Dod07g0441 1268 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 1268 - -
Dod07g0441 1268 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 963 1240 IPR027417 -
Dod07g0441 1268 Gene3D - 148 257 - -
Dod07g0441 1268 SUPERFAMILY SMAD/FHA domain 149 242 IPR008984 GO:0005515
Dod07g0441 1268 MobiDBLite consensus disorder prediction 347 367 - -
Dod07g0441 1268 CDD FHA 166 249 IPR000253 GO:0005515
Dod07g0441 1268 Pfam AAA+ lid domain 1157 1193 IPR041569 -
Dod07g0441 1268 Gene3D - 962 1241 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0441 Dod-Chr7 5849788 5861350 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0441 999 1204 Calmodulin-binding Proteins AT3G56690 36.667 1.15e-31 132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g0441 07 5849788 5861350 Dod07g0441 07 5849788 5861350 ECH