Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0435 ATGAAGTTCTGCAAGACATACCAAGAGTACATGCAAGGGCAGGGGCAGAAGCTCCCTGTTGTTGGCTTCAAGAAGCTTAAAAAGATCATGAAAAAATGTAGGAGTGGTTGTGAACCCCAAAGAACCACCCCTAATAGCATCAAAACCTGCCCTGGTCAATGCCCAGTGTGTGATGGGACCTTCTTCCCTTCCCTACTCAATGAAGTGTCAGATATAGTAGGGTGCTTTAACCAGCGTGCCCAACAATTGCTGGAGCTGCATCTGGCTTCTGGCTTTAGGAAGTACCTTTTCTGGTTGAAAGGAAAATCAATATGGGATCATACTGCTCTAGTTCAAGAAGGGAAAGATCTGGTCACTTATGCGCTGATAAATGCCATTGCTATTCGAAAAATACTAAAGAAATATGATAAGATTCATTATTCAAAACAAGGGCAATTATTCAAGTCACAAGTTCAGACTATGCACAAGGAAATTCTTCAGAGTCCTTGGCTTATTGAGCTTATGGCCTTATACATCAACTTAAGGGAAACCAATGTCCAGTCAAGGAAGGCATCTGCTTTGTTTGATGGATGTTCCCTCACATTTAAGGATGGAAAACCATCACTTACTTGTGAGATCTTTGGTTCCATCAAAGTTGATATTGACTTGACTTGCTCCGTATGCTTGGACACAGTGTTTGATCCAGTATCTCTGACTTGTGGCCATATATTCTGCTACACCTGTGCTTGCTCAGCTGCATCAGTAACAATTGTTGATGGACTTAAGGCAGCAGGTCCTAAAGAGAAATGCCCTCTATGCCGAGAGGGAGGAATGCATGAAGGTGCTGTACACTTGGAAGAATTAAATATTCTGTTAGGTCGAAGCTGCAAGGACTCCTGGGAGGAAAGGCTTCAGATGGAGAGGGTAGAAAGGGTAAAGCAGGTGAAAGAGCATTGGGAATCACAGTGTAGGGCTTTCATGGGAATCTAA 969 0.4314 MKFCKTYQEYMQGQGQKLPVVGFKKLKKIMKKCRSGCEPQRTTPNSIKTCPGQCPVCDGTFFPSLLNEVSDIVGCFNQRAQQLLELHLASGFRKYLFWLKGKSIWDHTALVQEGKDLVTYALINAIAIRKILKKYDKIHYSKQGQLFKSQVQTMHKEILQSPWLIELMALYINLRETNVQSRKASALFDGCSLTFKDGKPSLTCEIFGSIKVDIDLTCSVCLDTVFDPVSLTCGHIFCYTCACSAASVTIVDGLKAAGPKEKCPLCREGGMHEGAVHLEELNILLGRSCKDSWEERLQMERVERVKQVKEHWESQCRAFMGI* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0435 322 ProSiteProfiles Zinc finger RING-type profile. 218 267 IPR001841 -
Dod07g0435 322 PANTHER E3 UBIQUITIN-PROTEIN LIGASE BAH1 1 322 - -
Dod07g0435 322 SUPERFAMILY RING/U-box 211 269 - -
Dod07g0435 322 SMART ring_2 218 266 IPR001841 -
Dod07g0435 322 Pfam Zinc finger, C3HC4 type (RING finger) 215 268 - -
Dod07g0435 322 ProSitePatterns Zinc finger RING-type signature. 233 242 IPR017907 -
Dod07g0435 322 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 209 320 IPR013083 -
Dod07g0435 322 ProSiteProfiles SPX domain profile. 1 149 IPR004331 -
Dod07g0435 322 PANTHER E3 UBIQUITIN-PROTEIN LIGASE BAH1 1 322 IPR033326 -
Dod07g0435 322 CDD SPX_BAH1-like 2 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0435 Dod-Chr7 5763053 5767714 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0435 215 267 C3H Transcription Factor Family AT4G28270 39.655 1.14e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0435 K16275 - gmx:100787904 548.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g0435 07 5763053 5767714 Dod07g0435 07 5763053 5767714 ECH
Dod07g0435 07 5763053 5767714 Dod01g3093 01 71593648 71596646 PCT