Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0417 ATGATCAGAGTGTCACTCCTTAGTACTTTACTTCAGTTTATGTTTTTAAGTTTCTTCTCAAATGCTGGCCAGTTGGTATTTGCAAAAGGGAAAGCCAATGTAAGAGATGCATGCAGGGTGACGAGGTACCCATATCTTTGTGTCCACTCTCTAGCACCATTCTCTAGCATTGCTGGAAGGAGCCCCAGCAAGTGGGCAAGGGTAGGAGTTTCGGTGACAATTGGTGAGGTTAAGAATGTTCAAGCATACCTTGCAAAGTTGAAGAGGCAAGGGCATTTGAGGGGAAGATATGATGGAGCTGCACTTTCTGATTGTGTGGAGACTTTTGGGGATGCCCTTGATGAGCTTCACAGGTCCCTTGGTGTGCTAAGGAGGCTCAGCAGAAGCACATTTGGTACACAAATGGGGGACCTCAACACTTGGATCAGTGCAGCACTCACTGATGAAGATACTTGCCTTGATGGGTTTCGAGGGAAAAAGGGAAAGAAAATCAGGTTGCTGCAAAATAGGGTTCTGAAAGCCTATTATAAAACTAGTAATGCTTTAGCCCTTGTTAACAAACTTGCCACTTCAGGTCTGGAAAGCATATCTGATCCCTGA 600 0.45 MIRVSLLSTLLQFMFLSFFSNAGQLVFAKGKANVRDACRVTRYPYLCVHSLAPFSSIAGRSPSKWARVGVSVTIGEVKNVQAYLAKLKRQGHLRGRYDGAALSDCVETFGDALDELHRSLGVLRRLSRSTFGTQMGDLNTWISAALTDEDTCLDGFRGKKGKKIRLLQNRVLKAYYKTSNALALVNKLATSGLESISDP* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0417 199 Pfam Plant invertase/pectin methylesterase inhibitor 33 184 IPR006501 GO:0004857
Dod07g0417 199 PANTHER PECTINESTERASE INHIBITOR-LIKE 28 183 - -
Dod07g0417 199 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 190 IPR035513 -
Dod07g0417 199 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 28 183 - -
Dod07g0417 199 SMART PMEI_2 29 184 IPR006501 GO:0004857
Dod07g0417 199 CDD PMEI-like_3 37 190 - -
Dod07g0417 199 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 33 188 IPR035513 -
Dod07g0417 199 TIGRFAM PME_inhib: pectinesterase inhibitor domain 5 188 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0417 Dod-Chr7 5488759 5489512 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0417 32 193 Carbohydrate Esterase AT3G14310 33.929 1.68e-18 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0417 - - gmx:100791264 250.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g0417 07 5488759 5489512 Dod07g0417 07 5488759 5489512 ECH