Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod07g0411 ATGAGTCGCGGTGGTGCAGCAGGAGGAGGAGGAGGTGCGAAGGGGAAGAAGAAGGGAGCGAGCTTCGTGATAGATTGCGCGAAGCCAGTGGAGGACAAGATCATGGACATCGCGTCTCTCGAGAAGTTCCTTCAGGAGAGGATCAAGGTCGGTGGCAAGGCCGGCGCGCTCGGCGATTCCGTCACCGTCACACGCGACAAGAGCAAGATCACCGTCACCTCCGACTCCAACTTCTCCAAACGATACCTGAAATACTTGACCAAGAAGTACCTGAAAAAGCACAACGTGAGGGATTGGCTTCGGGTGATTGCCTCCAACAAGGACCGCAATGTTTATGAGTTGAGATACTTCAACATTGCTGAGAATGAGGGTGAGGAGGAAGAATGA 387 0.5349 MSRGGAAGGGGGAKGKKKGASFVIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTRDKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENEGEEEE* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod07g0411 128 PANTHER 60S RIBOSOMAL PROTEIN L22 1 128 IPR002671 GO:0003735|GO:0005840|GO:0006412
Dod07g0411 128 Pfam Ribosomal L22e protein family 18 126 IPR002671 GO:0003735|GO:0005840|GO:0006412
Dod07g0411 128 Gene3D - 11 128 IPR038526 -
Dod07g0411 128 PANTHER RIBOSOMAL PROTEIN L22, PUTATIVE-RELATED 1 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod07g0411 Dod-Chr7 5436707 5438830 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod07g0411 1 128 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 85.938 4.34e-66 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod07g0411 K02891 - gmx:100500073 201.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod07g0411 07 5436707 5438830 Dod07g0411 07 5436707 5438830 ECH